Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01648 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCACCCCACTTCGCCCTCCTCCTCATCTTCTAGGAAAAGCAGAAAAAACAGTAAAAAGAAGCACGGATCAAGAGGCTCTTCGTTTGAGTATTGGAGGAATGAACCTCTTCATAGGATCCCTGATAGGGTATTCCTTAATGGCTCATCTGAATTTGCTTCCTTGTTCACTCAACAAGGCAAGAAGGGTACCAACCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACAATTTTCTGTGGAGTTTTCGATGGTCACGGTCCATATGGTCATATGGTTGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATACTCATTGGGAACTTAATGTTTCTGGTGGGGAAGTCCTCAAGGAGATTAGCAATAATGCTACTGGAAGCACAAACTCGGAAGATACAGCATTTATATCTGCTGATGAGGAATCCAGGGTATCCGTTGATGCCGAGGAAATGGAAAAATTCCCAGAAATCTTTCAATCACTTAGAGATTCCTTTTTAAAGGCATTCAAAGTTATGGATAGAGAATTGAAGACTCACCAAACTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTTTGGTTAAGCAGGGTCGTGATCTTGTTATTGGAAATATTGGTGACTCTAGAGCTGTGTTGGGTACAAGGGAGAAAGATGGTTCTCTTGCTGCAGTCCAGTTAACTGTGGATTTAAAACCTAATCTTCCAGCTGAAGCAGAGAGAATTCGCAAATGTAGAGGACGTGTTTTTGCTCTTCGTGATGAACCTGATGTTTGTCGAGTCTGGTTGCCGAACAATGATTCCCCTGGCCTTGCCATGGCAAGGGCTTTTGGAGATTTTTGTCTGAAAGATTTTGGACTAATATCTGTTCCAGATGTGTCACACAGAAGACTCACTGAGAAGGATGAGTTTGTTGTCATGGCAACCGATGGGATTTGGGATGTCCTATCAAACAAGGAAGTGGTAGACATAATAGCAGCTGCACCAAGGCGTGCAACAGCAGCTAGATCACTGGTTGAGTTAGCAGTTAGAGCATGGAGATACAAATATCCAACATCAAAAGTTGACGATTGTGCCGTGATTTGTCTCTTTCTAGACTCAGGCATACATAAAATCTCCACTGCTTCTCATGCAAACAATTCCAAAGAGCATCCTCAAAGTTCAGGAATTCAAGTCAGCGACTACGGTGATAACGAAGGTGTTTCTGAACCTAATGCTCTAGAAAGATCCGGAACATGCAGAGAAATCAATAATAATAACCACAACGAGGAAGAGATAGAGATAGATGCTGAGGCAGAAAAAGAGTGGTCTGCTCTTGAAGGTGTATCGCGTGTCAACACATTATTAAACCTTCCGAGATTCTTTCCTGATAAAGAAGACAAATCAGCTGCAGCAGCTGGGACCAGAAAACTCAAATGA 1470 0.4286 MGSCFSAESRSPHPTSPSSSSSRKSRKNSKKKHGSRGSSFEYWRNEPLHRIPDRVFLNGSSEFASLFTQQGKKGTNQDAMVVWENFCSREDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNTHWELNVSGGEVLKEISNNATGSTNSEDTAFISADEESRVSVDAEEMEKFPEIFQSLRDSFLKAFKVMDRELKTHQTIDCFCSGTTAVTLVKQGRDLVIGNIGDSRAVLGTREKDGSLAAVQLTVDLKPNLPAEAERIRKCRGRVFALRDEPDVCRVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVSHRRLTEKDEFVVMATDGIWDVLSNKEVVDIIAAAPRRATAARSLVELAVRAWRYKYPTSKVDDCAVICLFLDSGIHKISTASHANNSKEHPQSSGIQVSDYGDNEGVSEPNALERSGTCREINNNNHNEEEIEIDAEAEKEWSALEGVSRVNTLLNLPRFFPDKEDKSAAAAGTRKLK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01648 489 MobiDBLite consensus disorder prediction 394 433 - -
Vifa5g01648 489 MobiDBLite consensus disorder prediction 394 412 - -
Vifa5g01648 489 ProSiteProfiles PPM-type phosphatase domain profile. 63 382 IPR001932 -
Vifa5g01648 489 Pfam Protein phosphatase 2C 111 360 IPR001932 -
Vifa5g01648 489 MobiDBLite consensus disorder prediction 1 39 - -
Vifa5g01648 489 MobiDBLite consensus disorder prediction 1 23 - -
Vifa5g01648 489 SUPERFAMILY PP2C-like 58 383 IPR036457 -
Vifa5g01648 489 SMART PP2C_4 54 380 IPR001932 -
Vifa5g01648 489 Gene3D - 60 384 IPR036457 -
Vifa5g01648 489 PANTHER PROTEIN PHOSPHATASE 27 380 IPR015655 GO:0004722|GO:0006470
Vifa5g01648 489 CDD PP2Cc 63 382 IPR001932 -
Vifa5g01648 489 FunFam probable protein phosphatase 2C 33 58 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01648 Vifa-Chr5 486692365 486695565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01648 1 475 PP2C-type Phosphatase Gene Family AT3G02750 60.755 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01648 - - cam:101510446 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01648 5 486692365 486695565 Vifa5g01648 5 486692365 486695565 ECH