Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01634 ATGACTGGAAAAGCGAAGCCAAAGAAGCACACGGCGAAGGAGATCCAAGCCAAGGTGGACGCAGCGCTGACCAACCGCGGCGGAGGCAAAGCCGGTTTGCTTGATCGGATCGGTGTTGAGAAGGGAGGACACGCCAAGTGGGAGTGCCCTCACTGCAAAACAACCGTGCCTGATGTGAAATCGATGCAGATTCATCACGATGCTCGTCATCCAAAGATCCCCTTTGAGGAAGACAAGCTTGTGAATCGTCATGCAACTGCGGCTGCTGTTCCGGAATCTTCCAAGCCTCGCCCTGGTGTTCGTGGTAGCCTCAAAAAGTGA 321 0.5452 MTGKAKPKKHTAKEIQAKVDAALTNRGGGKAGLLDRIGVEKGGHAKWECPHCKTTVPDVKSMQIHHDARHPKIPFEEDKLVNRHATAAAVPESSKPRPGVRGSLKK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01634 106 PANTHER GEO09665P1-RELATED 1 82 IPR045230 -
Vifa5g01634 106 MobiDBLite consensus disorder prediction 86 106 - -
Vifa5g01634 106 SUPERFAMILY Expressed protein At2g23090/F21P24.15 27 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01634 Vifa-Chr5 481271904 481272224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01634 1 106 C2H2 Transcription Factor Family AT3G02790 75.472 6.35e-55 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01634 - - gmx:100784149 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01634 5 481271904 481272224 Vifa5g01634 5 481271904 481272224 ECH