Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01600 ATGGCTTATCATCTTACTCTTCTTCATGCTCCTCCTTTTTCAGTTCCCACTAAAAACTCTCATTCCAAATATACTACCTTAAAACCACTCAAACCCACCACCAATTTTCCTTCTTTCTTTCATTGTTCTTCAATAACATCACAAAGAGGAACTTGTTCATCACTGATTGCTTGTTCCTCTTTAAATGGTAGAGGGCCAAATGATTCAGTGGATGATGGTGTTAAGAGCTTGGAGCAACTTGTTGAAGAAAAACAACGAGCTGAATTGTCTGCTAGAATTGCCTCAGGAGAATTCACTGTCAAACAGGAATCTGGTTTACCTTCTGGGTTAAAGAAGAGTTTGTCAAATTTGGGAGTGCCCAATGAGATTCTGGAGTTTTTATTTGGCCTGTATCCCAAAATTCCCGAGGCAAAAGGGTCGATTAAAGCCATTCGAAGCGAGGCTTTCTTCATTCCCTTGTATGAACTTTTCATCACATATGGTGGGATTTTCAGGCTTAATTTTGGTCCAAAGTCCTTTCTGATAGTATCGGATCCGGCTATTGCAAAACACATATTGAAAGACAATGCGAAGGCTTATTCTAAGGGTATCTTGGCTGAGATCTTGGATTTCGTAATGGGGAAAGGGCTTATCCCAGCTGATGGGGAAATATGGCGAGTTAGACGGCGTGCTATAGTTCCAGCATTGCATCTGAAGTTTGTAGCAGCTATGATTGGCCTTTTTGGACAAGCTACAGATAGGCTTTGCCAGAAGCTAGATACTGCTGCATCTGATGGAGAAGATGTTGAGATGGAGTCACTTTTCTCTCGATTGACGCTGGACGTCATTGGCAAAGCAGTGTTCAATTATGATTTTGATAGTTTATCAAATGATACTGGTATAATTGAGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTTCTCCGATTCCCGTCTGGGATATCCCAATATGGAAAGACATATCCCCACGTCAAAGGAAAGTTGCTGCATCTCTCAAGCTTGTCAATGATACACTTAACAATCTCATCGCAATATGCAAGAGAATGGTGGATGAAGAAGAGCTACAGTTTCATGAAGAGTACATGAATGAACAAGATCCAAGTATTCTTCACTTCTTGTTGGCATCCGGAGATGATGTTTCAAGTAAGCAACTTCGTGACGACTTAATGACAATGCTCATTGCGGGACATGAAACATCGGCCGCTGTTTTAACTTGGACCTTCTATCTTCTTTCAAAGGAGCCTAGTGTCGTGTCGAAGCTCCAAGAAGAGGTTGACTCGGTACTTGGTGACCGGTTTCCAACTATTGAAGACATGAAGAAACTCAAATATACAACTCGGGTGATTAACGAGTCGTTGAGGCTTTATCCACAACCACCTGTGTTGATTCGGCGCTCTCTTGAAAATGACGTTCTTGGAGAATATCCTATAAAAAGAGGAGAAGATATCTTTATATCTGTCTGGAACCTACACCGCAGTCCAACCTTGTGGGATGGTGCTGATAAATTTGAACCGGAAAGATGGCCGTTAGATGGACCTAACCCTAACGAGACGAATCAAAATTTCAAATATCTTCCATTTGGTGGAGGACCGCGGAAATGTATAGGGGATATGTTTGCTTCATACGAGACTATAGTAGCCCTTGCAATGCTTGTTAGTCGGTTCAATTTTCAAATGGCGGTTGGAGCTCCACCGGTTGTGATGACTACAGGAGCCACAATTCATACAACACAAGGATTGAATATGACTGTAACGCGCAGAATAAAACCTCCGATTGTGCCCTCGTTACAGATGTCGACATTGGAAGTGGATCCGTCCACGAACATTTCTGATCAAGAGGAAATAGGTCAGAAAGGCCAAGTTTATCAGGCTCAAAAGTCTTGA 1893 0.4205 MAYHLTLLHAPPFSVPTKNSHSKYTTLKPLKPTTNFPSFFHCSSITSQRGTCSSLIACSSLNGRGPNDSVDDGVKSLEQLVEEKQRAELSARIASGEFTVKQESGLPSGLKKSLSNLGVPNEILEFLFGLYPKIPEAKGSIKAIRSEAFFIPLYELFITYGGIFRLNFGPKSFLIVSDPAIAKHILKDNAKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHLKFVAAMIGLFGQATDRLCQKLDTAASDGEDVEMESLFSRLTLDVIGKAVFNYDFDSLSNDTGIIEAVYTVLREAEDRSVSPIPVWDIPIWKDISPRQRKVAASLKLVNDTLNNLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVSKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDVLGEYPIKRGEDIFISVWNLHRSPTLWDGADKFEPERWPLDGPNPNETNQNFKYLPFGGGPRKCIGDMFASYETIVALAMLVSRFNFQMAVGAPPVVMTTGATIHTTQGLNMTVTRRIKPPIVPSLQMSTLEVDPSTNISDQEEIGQKGQVYQAQKS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01600 630 Coils Coil 77 97 - -
Vifa5g01600 630 FunFam Carotene epsilon-monooxygenase, chloroplastic 135 592 - -
Vifa5g01600 630 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 530 539 IPR017972 GO:0005506|GO:0016705
Vifa5g01600 630 SUPERFAMILY Cytochrome P450 145 590 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 Gene3D Cytochrome P450 132 596 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PANTHER CYTOCHROME P450 FAMILY 4 155 589 - -
Vifa5g01600 630 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS P450 superfamily signature 528 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS P450 superfamily signature 398 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS P450 superfamily signature 537 548 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 MobiDBLite consensus disorder prediction 606 630 - -
Vifa5g01600 630 CDD CYP97 151 584 - -
Vifa5g01600 630 PRINTS E-class P450 group I signature 537 560 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS E-class P450 group I signature 157 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS E-class P450 group I signature 407 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS E-class P450 group I signature 449 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS E-class P450 group I signature 387 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS E-class P450 group I signature 527 537 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS E-class P450 group I signature 271 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 PRINTS E-class P450 group I signature 489 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01600 630 Pfam Cytochrome P450 149 572 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01600 Vifa-Chr5 466159318 466163660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01600 63 613 Cytochrome P450 AT1G31800 80.961 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01600 K15747 - gmx:100780770 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01600 5 466159318 466163660 Vifa5g01600 5 466159318 466163660 ECH