Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g01594 | ATGGAGCTTCAGTATTTCTACATTCTTCATCTCACTGTTATGTTCCTAAATATGTTTCCTCAGTTACTAACCTGCCAACAAGAATATCTCAATAGCACTGTCTTTGACTGCACTAACAACCCTTCTGTACCAAAAGGATACCTCTGCAATGGCCTTAAAAAGTCATGCACTTCCTTTTTAGTTTTCAAGTCAAAACCTCCCCACAACAACCCTGCAAGAATTTCCAACCTTCTTGGCTCTGAAGCATCTACCATAGCCTCGATCAACAAGATATCGATTAATGAGAAGATTCCTTCGAATAAATCAATCATTGTCCCGGTTTTCTGTTCATGTGCTGGAAATATCTACCAGCATAGCACATCTTACTCTGTCAAGCAGAATGACACCTATTATGAGTTGGTAAAAGAAACTTATCAAGGCCTTACAACCTGCCAGGCATTGATGGGTCAGAATTACTATGCTCCTGTTAACATTGCAATTGGTGCTGAGCTTACAGTTCCGGTACTATGTGCTTGTCCAACGAAAAACCTGACGGCAAAAGGGGTTACCTCCTTGCTAGTTCACATGGTGAACTATGGTGACACAGTTAAATCCATAGGAGAAGCTTATGGTGTTGATGAACCTAGCATGCGAGAGGCCAATGAGTTTCCAGTGCTACAAAGTGCAAACAGCACTGTCGTCCTCTTTGCTTCGACGCCTATAGTAGTTCCTCTGAGAAGTATGAGCTGCAAAGAGAACCCAGAGAGATTCTATTGCAAATGTTTTGAGGAACTGCACGCTGATGGAAGCTCCAAGGGTGTTTTCTGTGATGAATCTCATCGTCAAAAAATCCCTGCAAAATTGGTTGCTGCCTCAGGTATTGGAATTGGTACAGGCTTTCTGTGTTTGTTTCTTTTGGGTTACAGATTATATCAATGCATAACGATAAAGAGAGAAAGAATCCGAAAGGAAAGGCTGTTCTGTCAAAATGGTGGCTACTTGTTACAAGAGAAGTTATCATCCTATGGAAACGGAGAAATGGCAAAGCTTTTTAATGCAGAGGAGCTGCAAAGAGCAACGGATAACTATAACCGAAGTCGGTTTCTGGGCCAGGGAGGCTATGGCACAGTGTACAAAGGAATGTTACCCGATGGAACGATAGTAGCAGTTAAAAAGTCGAAACAGCTTGACAGGAACCAGATAGAAACTTTTGTCAATGAAGTAGTCATCTTATCTAACATCAACCACAGGAACATTGTCAAACTCTTAGGTTGTTGTCTTGAGACAGAAACCCCAATACTTGTTTACGAATTTATCCCGAACGGAACTCTTTCCCAACATATACATAGGAAAGACCGTGATTCATCCCTTTCATGGGAAAGTCGACTTAGAATTGCTTGTGAAGTTGCTGGAGCAGTGTCATATATGCATTTTTCAGCTTCTATTCCAATCTTCCATAGAGACATCAAACCTACCAACATACTCTTAGACAGTAACTATAGTGCCAAAGTGTCTGATTTCGGGACATCAAGATCAATACCATTGGATAAGACTCACCTAACCACATTTGTAGGTGGAACTTTTGGGTATATAGACCCTGAATATTTTCAGTCCAGTCAATTTACAGATAAGAGTGATGTATATAGTTTCGGTGTTGTTCTTGTAGAGATTATAACCGGAAGAAAGCCCAATTCATTCTATGATGAAGATGAGGGTCAAAACATGATTGCACAATTCATTTCTGTAACGAAAGAGAACAAACTTTCTCAAATAGTAGATTCCAGAGTGCAAAAGGAAGCAGGGAAAGACACCATTCTTACTATTTCGAATCTCGCAATCAGATGCTTGAGACTTAATCATAAGAAAAGACCAACAATGAAAGAGGTTTCAGCAGAGTTAGAAACACTGAGAAAGGCACAAAGTTCCTTTCAAATCAACCATGATCACGATGAATCATCAAGTGATGATGAACAATCATTTGGGCACACAATCAATGAAACAACAGACCAAGAATCCAGAGACGAAAGCATTTCACTTTCCTTACAAATAGAATCCACGTCCTTCTGA | 2046 | 0.4022 | MELQYFYILHLTVMFLNMFPQLLTCQQEYLNSTVFDCTNNPSVPKGYLCNGLKKSCTSFLVFKSKPPHNNPARISNLLGSEASTIASINKISINEKIPSNKSIIVPVFCSCAGNIYQHSTSYSVKQNDTYYELVKETYQGLTTCQALMGQNYYAPVNIAIGAELTVPVLCACPTKNLTAKGVTSLLVHMVNYGDTVKSIGEAYGVDEPSMREANEFPVLQSANSTVVLFASTPIVVPLRSMSCKENPERFYCKCFEELHADGSSKGVFCDESHRQKIPAKLVAASGIGIGTGFLCLFLLGYRLYQCITIKRERIRKERLFCQNGGYLLQEKLSSYGNGEMAKLFNAEELQRATDNYNRSRFLGQGGYGTVYKGMLPDGTIVAVKKSKQLDRNQIETFVNEVVILSNINHRNIVKLLGCCLETETPILVYEFIPNGTLSQHIHRKDRDSSLSWESRLRIACEVAGAVSYMHFSASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRSIPLDKTHLTTFVGGTFGYIDPEYFQSSQFTDKSDVYSFGVVLVEIITGRKPNSFYDEDEGQNMIAQFISVTKENKLSQIVDSRVQKEAGKDTILTISNLAIRCLRLNHKKRPTMKEVSAELETLRKAQSSFQINHDHDESSSDDEQSFGHTINETTDQESRDESISLSLQIESTSF | 681 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g01594 | 681 | ProSiteProfiles | Protein kinase domain profile. | 356 | 629 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g01594 | 681 | CDD | STKc_IRAK | 362 | 629 | - | - | |
Vifa5g01594 | 681 | Gene3D | Phosphorylase Kinase; domain 1 | 328 | 431 | - | - | |
Vifa5g01594 | 681 | ProSitePatterns | Protein kinases ATP-binding region signature. | 362 | 385 | IPR017441 | GO:0005524 | |
Vifa5g01594 | 681 | SMART | serkin_6 | 356 | 629 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g01594 | 681 | MobiDBLite | consensus disorder prediction | 667 | 681 | - | - | |
Vifa5g01594 | 681 | Gene3D | Transferase(Phosphotransferase) domain 1 | 432 | 654 | - | - | |
Vifa5g01594 | 681 | MobiDBLite | consensus disorder prediction | 637 | 681 | - | - | |
Vifa5g01594 | 681 | SUPERFAMILY | Protein kinase-like (PK-like) | 340 | 626 | IPR011009 | - | |
Vifa5g01594 | 681 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 144 | 637 | IPR045274 | GO:0007166 | |
Vifa5g01594 | 681 | FunFam | Wall-associated receptor kinase 2 | 432 | 649 | - | - | |
Vifa5g01594 | 681 | Pfam | LysM domain | 188 | 237 | IPR018392 | - | |
Vifa5g01594 | 681 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 477 | 489 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa5g01594 | 681 | FunFam | Wall-associated receptor kinase 2 | 327 | 431 | - | - | |
Vifa5g01594 | 681 | Pfam | Protein kinase domain | 356 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g01594 | Vifa-Chr5 | 465298963 | 465301179 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g01594 | 286 | 633 | Receptor kinase-like Gene Family | AT1G16130 | 57.143 | 3.18e-139 | 424 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vifa5g01594 | Pkinase | 7.5e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g01594 | - | - | gmx:100795455 | 1017.3 |