Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g01561 | ATGGGATTCCCCATAGGGTACCCTGCAGTTTCCGTCCCCAACCTCTTCCTTCTCCTTCTCTCTCTCCTCGCTTTTCTACGATCGCTAGCCATCTCCTTCCTCTCTCTCCTCCATCTCTCCGACCTCCTCGACACCAATTTCTCCTCCGCCACCTTAACGGAACCACTCTCCAACCCTCCCACCCTCTCCGCAATCCTCATCCGCCAATTCCTCCCCGTCGTCAGTTACCGTGACCTAGATTTGCCGGCGGTAGCGTGCGCGGTGTGTCTGGACGAATTTACCGAAGAGGAAGAGATCAGGTGTATGACGAATTGTAAACATATTTTTCACAAGACGTGTGTGGACCGTTGGATTGATCATGATCAGAAGACGTGTCCGCTTTGTAGGACCCACTTTGTACCTTGTGCTAAAATAGAAGATTATAATCAACGCTTATGGGCGGCTTGTCAATCTGAATGTGAAGACGATGATGATTCTCCTTTTTCGCAACATGATGACGATTACTACATTGCTTCAATTTGA | 522 | 0.4904 | MGFPIGYPAVSVPNLFLLLLSLLAFLRSLAISFLSLLHLSDLLDTNFSSATLTEPLSNPPTLSAILIRQFLPVVSYRDLDLPAVACAVCLDEFTEEEEIRCMTNCKHIFHKTCVDRWIDHDQKTCPLCRTHFVPCAKIEDYNQRLWAACQSECEDDDDSPFSQHDDDYYIASI | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g01561 | 173 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 83 | 133 | IPR013083 | - | |
Vifa5g01561 | 173 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 23 | 148 | - | - | |
Vifa5g01561 | 173 | Pfam | Ring finger domain | 86 | 129 | IPR001841 | - | |
Vifa5g01561 | 173 | SMART | ring_2 | 86 | 128 | IPR001841 | - | |
Vifa5g01561 | 173 | ProSiteProfiles | Zinc finger RING-type profile. | 86 | 129 | IPR001841 | - | |
Vifa5g01561 | 173 | SUPERFAMILY | RING/U-box | 66 | 143 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g01561 | Vifa-Chr5 | 453238246 | 453238767 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g01561 | 1 | 159 | C3H Transcription Factor Family | AT1G63840 | 42.012 | 1.39e-40 | 133 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g01561 | K16281 | - | gmx:100813224 | 182.956 |