Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01559 ATGTTATCGTCCAGAGACTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGATTCAAGAGTAATGAAGTTGGAGGCTACAAAATTTCGACCGCGAGAGGTAGTAAAGCACGTGCTTCAGACAGCTGTAGCATCATTGCAGAAAATATTAACCTTGGAAGGACATGTAACAGATGATGTACCTATCAAGGTTACTGGCAATGTATTAAGGATTAGACAAATCCTCACAAATTTAATCAGCAACGTCATCAAGTTTACACATGAAGGCAAAGTTGGGATAAACCTTCATGTTATGCAAGAGCCAATTTTTTCAAAAAGCTGA 333 0.3754 MLSSRDLVLQLINDILDLSKVDSRVMKLEATKFRPREVVKHVLQTAVASLQKILTLEGHVTDDVPIKVTGNVLRIRQILTNLISNVIKFTHEGKVGINLHVMQEPIFSKS 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01559 110 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 1 101 - -
Vifa5g01559 110 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 13 101 IPR036890 -
Vifa5g01559 110 Gene3D - 3 108 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01559 Vifa-Chr5 452708164 452708496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01559 1 107 Histidine Kinase Gene Family AT5G10720 80.374 1.21e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01559 - - tcc:18587650 181.8