Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g01554 | ATGGAATTCTCTATAGGCTACCTTTCAGTTTCCGTTCCCAATCTTTTTCTTCACCTATTCTCTCTCCTCGACTTCCTAAGATCCCTTGCCATCTCCTTGCTCTCTCTCCTCCACCTCTCCGACCTCCTCGACGCCGCAGATGAAGAGATCAGGTGTATCACGAATTATAAACATATTTTTCACAAGACCTGTGTGGACCGTTGGATTGATCATGACCAGAAGACGTGTCCGCTTTGTAAGACCCACTTTATACCTTGTGGTAAAATGGAAGATTATAATCAACGCTTATGTACGGCTTGTCAATCTGAATGTGAAGAATATAACGAGGATGTTGCTCTTTTTGCTCAACATGATGATGATCACTTGATTGCTTCACTTTGA | 381 | 0.4252 | MEFSIGYLSVSVPNLFLHLFSLLDFLRSLAISLLSLLHLSDLLDAADEEIRCITNYKHIFHKTCVDRWIDHDQKTCPLCKTHFIPCGKMEDYNQRLCTACQSECEEYNEDVALFAQHDDDHLIASL | 126 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g01554 | 126 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 34 | 84 | IPR013083 | - | |
Vifa5g01554 | 126 | Pfam | Ring finger domain | 57 | 80 | IPR001841 | - | |
Vifa5g01554 | 126 | SUPERFAMILY | RING/U-box | 47 | 83 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g01554 | Vifa-Chr5 | 452050813 | 452051193 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g01554 | 1 | 96 | C3H Transcription Factor Family | AT1G63840 | 28.188 | 3.45e-17 | 71.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g01554 | K16281 | - | gmx:100813224 | 93.5893 |