Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01532 ATGGCTAAGAGGTCTCAACGATTCCCTGTGCAGTATGAGAAAGATCAGTCAGGTTGTATGTGGGGATTTATTAGTATGTTTGATTTTCGTCATGCCCGCTTTACTCGGAAATTGATTGCAGATAAGAGGCACAACAACAAGCATGCTCTAGATTTTCACTTTTCTGTTTCTATAGAGGCTGTACCTACCAAGAACAAATTCGAGGCGTTGAGCGATTTGGATGAAGAATATCAAGTTAATTTTGACAGAGGAGAGAGTAAGAGACTAACAGTGAAAACAGATGCTGACAAGGTTAGTGTAAAGAAACTCATAGAAGAAGAGATGTTCATTGACCGGGATGAAGTAAAGGGTCAAAGTAATAATGTAGGATCAAAGCGAACCGAATTAGGGTCTCGAGATTCCCCAACGACAGATTCCAAAAGAAAGAGAAACTCGCGCAAGAAAAGCCGAGATATGGATACTAATGATCAGAATGTGACTTTGAAATCTGAATTCTCGGATAATCAGCGCTTAAAGCAACTATCGAGAGATAATCTAGATTTGGACAAGATAATGGAAGATTTTTGTCAAATCGAACAAGCTTGTTCCTTGATGAATGACGATGGTGATGATGATAGCAAAGTTAATGCTCAATCGAACCAAAAGAACGCCAATTCTGAAGCACTTGCACGAGATGCGATTCATGATTTTGTGAATCAGAAGATATTGAGTGGGAAAGATCTTGTAGAAGATGAGAAACTCCTTTGCTCGCATGAACTCATGGAAACACTTCAGGAGTTGGAGAATGCTCGAGGGAGAAGTGAAAAAGGATTCAATTCTGTTGCTGACTCCAACTTCTCCGAACAAGACCTTCGCAAACAAGATCTTCGCAGTCTAAAAGAAACCAGGGAGATTGTCAACCGAAAGCATCGTAAGTTTTTCTGGAAAAAGGTGAAGTCTCAATCAAAAGTTCCAACAAATAAAATTGTGAAAACTGAGGTTCCAAATCGAATTGTCATTCTGAAACCTGCAACAACGGGCATGCAAATTTCTGAAAGTGAAAATAATATTGCTTCATCGCCTGATATGCGTGATATTGTCCCTTACAAAGGTCCTTCTTCTATGAGATTTGGTTCGCATTTTTCTCTTACAGAGATAAAAAGGAAATTAAAACATGCTATAGGAAAGGAGAAGAGTGGAAGCCACGAATTCCCCGTCGAAGGTGAAAACATCGGCTCAAGAGGCAAGGCCAATGGTAAAGATAAAAGTGGGATGAACTCTCCTAATAAAGACCGTTTCTTCATGGAAAAAATTGCAAGACCTGTGTTTGATGTTGTGAAAGGAAACAAGACTAGTACATTGAAAGACTCTGAATTGAATGCAGAACGTGAAAGTGGTTCTAAGAAGGAAAAGGTTTCTAACATTTACGTCGAGGCTAGGAAACACTTATCTGAGATGCTAGAAAATGGAGATGATAACGCAAGCATTTCTAGCAGGCAGATTCCGAAAACCCTCGGGAGAATTCTATCTCTTCCTGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGAGGGAATTTGGGGCATCATTATGTGACTGGCACTGCACATGCGAGGTTTCCCATGCCAGATAAAATTATGGAGGTTAATGATGATAACTTGTCTCCCAAGCAAGCTACCTCTATTAATCAAACAGATCAGGAAACAAGCAATTCAGAGAACCGGTCAAGTGTTTGTGATGAAAATGAAAGATCTAATGAAGTACCGGAAATTGAGACAGAGTCAACTTTCTCGCATGATCTTAGTCATGTTCATACTTCTGAAGCCGATTATTCTGTTAGAGATGACATTGTTGCTGAAGGTAATTTCAAATTCACAGAAGATATAAATGTTTTGGAATCTTCCTCGGATCCAAATGATTACATTGATCGGAAGGACCAAAATCACAATGTCTCAGAAATTCCTGATGATGCCAGATTTTCTGAATGTTTGAATGAGGATGTGAAAGAAGAGAACCAACCATCATCTCCACTGTCTTCCCCTTCTCACTCTTCCATCCCAGAGAAAATCGAAGAGCTAGAAAGTAGTACAGATGTATCTGGTCGACCAAGTCCGGTTTCTGTGCTCGATATGCCATTCTCCGATGATGATCCTGGCTACTCCACATGTCAGCCTGTTAAATTGCGAGTACAATCACTACAAATTCGATTTGAGGAACAAGACACTTCATCAATGGATCGATTTCATAGAAGAAAATGTTGTTTTGAAGAAGATGAATTGATATATGACTACATAAATGTTGTTTTCCATGCCTCTGGTTTGACACAAGATCAACTATTGACGAAATGTCTTACCTCAAACAAGATACTAGATCCTTCCTTGTTTGATGAGGTAGAGTTCTTCTCGAACATGCTTTTCCACGAGCAGAAGCTCCTATTCGACAGTATCAACGAGGTTCTCATGGAGGTTTGTTGGCATTACTTTGGAGTATCACCTTGTGTATCATTTGTAAATCCTAGTATAAGACCAACACCAAATATGAAAAAGATTATTCTCAAAGTTTGGGAGGGAGTATGTTGGCATGTCCTTCCTTTGCCGCCACCGCATACTCTGGAACAAATTGTTAGGAAAGACCTGGCAAGAAATGGAACATGGATGGAACTTCGTATCGATGCTGAAACAGTTGGTTTTGAAATGAGCGACACCATTCTTGTAGAACTGATGGAAGATGCAATACTGAGCCTTGTGAGTCAAAGTACAGAGAGTTAA 2745 0.3978 MAKRSQRFPVQYEKDQSGCMWGFISMFDFRHARFTRKLIADKRHNNKHALDFHFSVSIEAVPTKNKFEALSDLDEEYQVNFDRGESKRLTVKTDADKVSVKKLIEEEMFIDRDEVKGQSNNVGSKRTELGSRDSPTTDSKRKRNSRKKSRDMDTNDQNVTLKSEFSDNQRLKQLSRDNLDLDKIMEDFCQIEQACSLMNDDGDDDSKVNAQSNQKNANSEALARDAIHDFVNQKILSGKDLVEDEKLLCSHELMETLQELENARGRSEKGFNSVADSNFSEQDLRKQDLRSLKETREIVNRKHRKFFWKKVKSQSKVPTNKIVKTEVPNRIVILKPATTGMQISESENNIASSPDMRDIVPYKGPSSMRFGSHFSLTEIKRKLKHAIGKEKSGSHEFPVEGENIGSRGKANGKDKSGMNSPNKDRFFMEKIARPVFDVVKGNKTSTLKDSELNAERESGSKKEKVSNIYVEARKHLSEMLENGDDNASISSRQIPKTLGRILSLPEYNFSPLGSPGGNLGHHYVTGTAHARFPMPDKIMEVNDDNLSPKQATSINQTDQETSNSENRSSVCDENERSNEVPEIETESTFSHDLSHVHTSEADYSVRDDIVAEGNFKFTEDINVLESSSDPNDYIDRKDQNHNVSEIPDDARFSECLNEDVKEENQPSSPLSSPSHSSIPEKIEELESSTDVSGRPSPVSVLDMPFSDDDPGYSTCQPVKLRVQSLQIRFEEQDTSSMDRFHRRKCCFEEDELIYDYINVVFHASGLTQDQLLTKCLTSNKILDPSLFDEVEFFSNMLFHEQKLLFDSINEVLMEVCWHYFGVSPCVSFVNPSIRPTPNMKKIILKVWEGVCWHVLPLPPPHTLEQIVRKDLARNGTWMELRIDAETVGFEMSDTILVELMEDAILSLVSQSTES 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01532 914 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 907 - -
Vifa5g01532 914 MobiDBLite consensus disorder prediction 662 678 - -
Vifa5g01532 914 MobiDBLite consensus disorder prediction 115 164 - -
Vifa5g01532 914 MobiDBLite consensus disorder prediction 630 661 - -
Vifa5g01532 914 MobiDBLite consensus disorder prediction 387 422 - -
Vifa5g01532 914 MobiDBLite consensus disorder prediction 625 706 - -
Vifa5g01532 914 MobiDBLite consensus disorder prediction 545 568 - -
Vifa5g01532 914 MobiDBLite consensus disorder prediction 539 594 - -
Vifa5g01532 914 MobiDBLite consensus disorder prediction 569 594 - -
Vifa5g01532 914 Pfam Domain of unknown function (DUF4378) 755 902 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01532 Vifa-Chr5 445277529 445281059 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01532 1 892 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.734 1.66e-87 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01532 - - gmx:100783243 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01532 5 445277529 445281059 Vifa5g01532 5 445277529 445281059 ECH
Vifa5g01532 5 445277529 445281059 Vifa4g00645 4 184708651 184712158 PCT