Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01531 ATGGCTAAGAGGTCTCAACGATTCCCTGTGCAGTATGAGAAAGATCAGTCAGGTTGTATGTGGGGATTTATTAGTATGTTTGATTTTCGTCATGCCCGCTTTACTCGGAAATTGATTGCAGATAAGAGGCACAACAACAAGCATGCTCTAGAGGCTGTACCTACCAAGAACAAATTCGAGGCGTTGAGCGATTTGGATGAAGAATATCAAGTTAATTTTGACAGAGGAGAGAGTAAGAGACTAACAGTGAAAACAGATGCTGACAAGGTTAGTGTAAAGAAACTCATAGAAGAAGAGATGTTCATTGACCGGGATGAAGTAAAGGGTCAAAGTAATAATGTAGGATCAAAGCGAACCGAATTAGGGTCTCGAGATTCCCCAACGACAGATTCCAAAAGAAAGAGAAACTCGCGCAAGAAAAGCCGAGATATGGATACTAATGATCAGAATGTGACTTTGAAATCTGAATTCTCGGATAATCAGCGCTTAAAGCAACTATCGAGAGATAATCTAGATTTGGACAAGATAATGGAAGATTTTTGTCAAATCGAACAAGCTTGTTCCTTGATGAATGACGATGGTGATGATGATAGCAAAGTTAATGCTCAATCGAACCAAAAGAACGCCAATTCTGAAGCACTTGCACGAGATGCGATTCATGATTTTGTGAATCAGAAGATATTGAGTGGGAAAGATCTTGTAGAAGATGAGAAACTCCTTTGCTCGCATGAACTCATGGAAACACTTCAGGAGTTGGAGAATGCTCGAGGGAGAAGTGAAAAAGGATTCAATTCTGTTGCTGACTCCAACTTCTCCGAACAAGACCTTCGCAAACAAGATCTTCGCAGTCTAAAAGAAACCAGGGAGATTGTCAACCGAAAGCATCGTAAGTTTTTCTGGAAAAAGGTGAAGTCTCAATCAAAAGTTCCAACAAATAAAATTGTGAAAACTGAGGTTCCAAATCGAATTGTCATTCTGAAACCTGCAACAACGGGCATGCAAATTTCTGAAAGTGAAAATAATATTGCTTCATCGCCTGATATGCGTGATATTGTCCCTTACAAAGGTCCTTCTTCTATGAGATTTGGTTCGCATTTTTCTCTTACAGAGATAAAAAGGAAATTAAAACATGCTATAGGAAAGGAGAAGAGTGGAAGCCACGAATTCCCCGTCGAAGGTGAAAACATCGGCTCAAGAGGCAAGGCCAATGGTAAAGATAAAAGTGGGATGAACTCTCCTAATAAAGACCGTTTCTTCATGGAAAAAATTGCAAGACCTGTGTTTGATGTTGTGAAAGGAAACAAGACTAGTACATTGAAAGACTCTGAATTGAATGCAGAACGTGAAAGTGGTTCTAAGAAGGAAAAGGTTTCTAACATTTACGTCGAGGCTAGGAAACACTTATCTGAGATGCTAGAAAATGGAGATGATAACGCAAGCATTTCTAGCAGGCAGATTCCGAAAACCCTCGGGAGAATTCTATCTCTTCCTGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGAGGGAATTTGGGGCATCATTATGTGACTGGCACTGCACATGCGAGGTTTCCCATGCCAGATAAAATTATGGAGGTTAATGATGATAACTTGTCTCCCAAGCAAGCTACCTCTATTAATCAAACAGATCAGGAAACAAGCAATTCAGAGAACCGGTCAAGTGTTTGTGATGAAAATGAAAGATCTAATGAAGTACCGGAAATTGAGACAGAGTCAACTTTCTCGCATGATCTTAGTCATGTTCATACTTCTGAAGCCGATTATTCTGTTAGAGATGACATTGTTGCTGAAGGTAATTTCAAATTCACAGAAGATATAAATGTTTTGGAATCTTCCTCGGATCCAAATGATTACATTGATCGGAAGGACCAAAATCACAATGTCTCAGAAATTCCTGATGATGCCAGATTTTCTGAATGTTTGAATGAGGATGTGAAAGAAGAGAACCAACCATCATCTCCACTGTCTTCCCCTTCTCACTCTTCCATCCCAGAGAAAATCGAAGAGCTAGAAAGTAGTACAGATGTATCTGGTCGACCAAGTCCGGTTTCTGTGCTCGATATGCCATTCTCCGATGATGATCCTGGCTACTCCACATGTCAGCCTGTTAAATTGCGAGTACAATCACTACAAATTCGATTTGAGGAACAAGACACTTCATCAATGGATCGATTTCATAGAAGAAAATGTTGTTTTGAAGAAGATGAATTGATATATGACTACATAAATGTTGTTTTCCATGCCTCTGGTTTGACACAAGATCAACTATTGACGAAATGTCTTACCTCAAACAAGATACTAGATCCTTCCTTGTTTGATGAGGTAGAGTTCTTCTCGAACATGCTTTTCCACGAGCAGAAGCTCCTATTCGACAGTATCAACGAGGTTCTCATGGAGGTTTGTTGGCATTACTTTGGAGTATCACCTTGTGTATCATTTGTAAATCCTAGTATAAGACCAACACCAAATATGAAAAAGATTATTCTCAAAGTTTGGGAGGGAGTATGTTGGCATGTCCTTCCTTTGCCGCCACCGCATACTCTGGAACAAATTGTTAGGAAAGACCTGGCAAGAAATGGAACATGGATGGAACTTCGTATCGATGCTGAAACAGTTGGTTTTGAAATGAGCGACACCATTCTTGTAGAACTGATGGAAGATGCAATACTGAGCCTTGTGAGTCAAAGTACAGAGAGTTAA 2721 0.3991 MAKRSQRFPVQYEKDQSGCMWGFISMFDFRHARFTRKLIADKRHNNKHALEAVPTKNKFEALSDLDEEYQVNFDRGESKRLTVKTDADKVSVKKLIEEEMFIDRDEVKGQSNNVGSKRTELGSRDSPTTDSKRKRNSRKKSRDMDTNDQNVTLKSEFSDNQRLKQLSRDNLDLDKIMEDFCQIEQACSLMNDDGDDDSKVNAQSNQKNANSEALARDAIHDFVNQKILSGKDLVEDEKLLCSHELMETLQELENARGRSEKGFNSVADSNFSEQDLRKQDLRSLKETREIVNRKHRKFFWKKVKSQSKVPTNKIVKTEVPNRIVILKPATTGMQISESENNIASSPDMRDIVPYKGPSSMRFGSHFSLTEIKRKLKHAIGKEKSGSHEFPVEGENIGSRGKANGKDKSGMNSPNKDRFFMEKIARPVFDVVKGNKTSTLKDSELNAERESGSKKEKVSNIYVEARKHLSEMLENGDDNASISSRQIPKTLGRILSLPEYNFSPLGSPGGNLGHHYVTGTAHARFPMPDKIMEVNDDNLSPKQATSINQTDQETSNSENRSSVCDENERSNEVPEIETESTFSHDLSHVHTSEADYSVRDDIVAEGNFKFTEDINVLESSSDPNDYIDRKDQNHNVSEIPDDARFSECLNEDVKEENQPSSPLSSPSHSSIPEKIEELESSTDVSGRPSPVSVLDMPFSDDDPGYSTCQPVKLRVQSLQIRFEEQDTSSMDRFHRRKCCFEEDELIYDYINVVFHASGLTQDQLLTKCLTSNKILDPSLFDEVEFFSNMLFHEQKLLFDSINEVLMEVCWHYFGVSPCVSFVNPSIRPTPNMKKIILKVWEGVCWHVLPLPPPHTLEQIVRKDLARNGTWMELRIDAETVGFEMSDTILVELMEDAILSLVSQSTES 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01531 906 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 899 - -
Vifa5g01531 906 MobiDBLite consensus disorder prediction 654 670 - -
Vifa5g01531 906 MobiDBLite consensus disorder prediction 622 653 - -
Vifa5g01531 906 MobiDBLite consensus disorder prediction 379 414 - -
Vifa5g01531 906 MobiDBLite consensus disorder prediction 617 698 - -
Vifa5g01531 906 MobiDBLite consensus disorder prediction 537 560 - -
Vifa5g01531 906 MobiDBLite consensus disorder prediction 531 586 - -
Vifa5g01531 906 Pfam Domain of unknown function (DUF4378) 747 894 IPR025486 -
Vifa5g01531 906 Coils Coil 906 906 - -
Vifa5g01531 906 MobiDBLite consensus disorder prediction 561 586 - -
Vifa5g01531 906 MobiDBLite consensus disorder prediction 107 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01531 Vifa-Chr5 445277529 445281059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01531 1 884 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.013 2.48e-89 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01531 - - gmx:100783243 1119.38