Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01518 ATGGCAACTGATATGCAAAGGCTGGTTGGAATGAGTGAGGATGATGACGAAATGGGAATGGGTGTGAAAGACGAGGATGACGAGGATGAAGATTACGAGGAAAATGGAGGTGAGCATGGGAATGCTTTACAAGTGGCAGAGTTTGATGGTGGGAGTGTGATGGGAGCTCGAGCTGATGACAATAGGTTTCAGCAGCAATACGAGTTTCAAGAGCAAGTAGGCACTCCGGGTGGAGGTAATCGAAGATCTAGACCGGTAGAAGAGAAAGAGAGGACTAAGCTAAGAGAAAGGCGCCGGAGGGCTATCACTGCACGGATCTTGGCAGGGCTTCGAAGGCATGGTAATTATAATCTTAGGGTTAGGGCTGACATAAATGATGTAATTGCTGCGCTAGCAAGGGAAGCTGGATGGGTTGTTCTTCCAGATGGCACTACTTTTCCCTCAAAATCTCAGGGTCAGACACCAGCTGGCGGCAATGCTGCAGTTGTTACTTCATCATCATCCCATGTGCCTTCCCAACATCCTCCATCTGTTTCCCTCAAGGGTGTTGCTTCTGGCATTAGGAGCCCACCTTCATCATCATCCCATGTGCCTTCCCAACATCCTCCGTCTGTTTCCCTCAAGGGCGTTGCTTCTGGCATTAGGAGCCCTTTAGAGTACAATGCATCTCCAATGAAAGGTGTTTACGTTCCAGCTCCATCTCCATCCCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCTATGTTAGGGGACGGAGAAGTGCAAAGAGACAATCCTCCAGTGATTGGTGGTTCAATAGATACCATTAATGAGAAGCAGATTTTTGACATTCCAGCCAGATTACCAGAACGTGATTTTGCTGGGTCCCCGTATGTTCCTGTTTATGTGATTGCTCCCGTTGGGAGTGATCAATATTAA 924 0.4773 MATDMQRLVGMSEDDDEMGMGVKDEDDEDEDYEENGGEHGNALQVAEFDGGSVMGARADDNRFQQQYEFQEQVGTPGGGNRRSRPVEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQGQTPAGGNAAVVTSSSSHVPSQHPPSVSLKGVASGIRSPPSSSSHVPSQHPPSVSLKGVASGIRSPLEYNASPMKGVYVPAPSPSPYDLSSSSRSQTSMLGDGEVQRDNPPVIGGSIDTINEKQIFDIPARLPERDFAGSPYVPVYVIAPVGSDQY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01518 307 MobiDBLite consensus disorder prediction 186 206 - -
Vifa5g01518 307 MobiDBLite consensus disorder prediction 18 35 - -
Vifa5g01518 307 MobiDBLite consensus disorder prediction 68 96 - -
Vifa5g01518 307 MobiDBLite consensus disorder prediction 233 261 - -
Vifa5g01518 307 MobiDBLite consensus disorder prediction 236 254 - -
Vifa5g01518 307 MobiDBLite consensus disorder prediction 147 209 - -
Vifa5g01518 307 Pfam BES1/BZR1 plant transcription factor, N-terminal 79 200 IPR008540 -
Vifa5g01518 307 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 78 247 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vifa5g01518 307 MobiDBLite consensus disorder prediction 1 41 - -
Vifa5g01518 307 MobiDBLite consensus disorder prediction 147 179 - -
Vifa5g01518 307 MobiDBLite consensus disorder prediction 82 96 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01518 1 303 Glycoside Hydrolase AT2G45880 51.792 3.90e-75 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vifa5g01518 BES1_N 4.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01518 K01177 - gmx:100805560 322.013