Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01427 ATGGATAATAACTATGGTTCATCTTCCCCGTATCGGTATCCAAACCCTTATATGTATCCCCCTAATCCTAACCCTAACCCTAACCGTAGCCCTAATCCTCATCAACCATATCCACCTCAAGCTTCAGTTCCTGATCCATATGCACATGCTCATCAACAATATCCACCTCCTGATCCATATGCACATGCTCATCAAACATATCCACCTCCTGATGCATATGCTCATCAACCATATCCACCTCCTGATGCACATGCTCATGCTCCTCCTTATCCATATCCTTATGTTTCTTCACATTCCTTGAACTATTCATATGCTAGATCGCCCCCATTATCGTCATCACCATCATCCAATTCTAATGCCCCTGCCCCTTATGAGTATCCATACCCTCCCCCTCCTCATCAATTAGTACCCTCACCCTCAGCTCCACCCTCTTATCCTTCTTATCCATACCATGTTGCTCCTGGGACTCATAATCCTCCTCGACCTTCCCTTTCACACCATGCTAGCTTATTACAACATGGATCAGCGTCGCATCGTTATTATTATCCACACAATGCTCCTCATGAAGAACGTCCTGATGTCCATTCGCGTCATAATAGCTTCTCTGGTCATTACTGGCATGACACATCAAGTTCAACCGCACTTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGATTGCAAAGTAGTGGTGGTGATAATTCCAAACCTTCTTATCCGCGTTTGGATGAACTAATGAACAATGTTAAGTTGTCTGATAACCAATCAACTGCTCCTGCTTCGCCTCCTGCTCCTGCTGCACAGCCTTTTATGCATTCAGTTTCTGTACCGAAGAATCAACAGAAAAAAGAGGATTTTTATGGACATTCTAATAACTCCTTCTCGGGTTGGGGATCCTCATATTCGAACCGGGTGAACTCGGGTAGGCTTTCGGATTATTCTGGCTCATTTAATGACTCAATGCATAGTCAGAGCTTGCAGGTTGTTCCGGTGCTGAATAAAGGGTCTTTGAAAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGATGCCAAAAATCTTCCAAATATGGACATGTTCCATAGAACATTGGGGGATATGTTTGGTAAATTACCTGGTGGTGTGAGCAATAAAATTGAAGGAACGATGAATAAGAAGATTACAAGTGATCCTTATGTTTCAATTTCAGTTTCAAATGCTGTGATTGGAAGGACTTTTGTCATTAGCAACAGTGAAAATCCTGTTTGGACTCAACATTTCTATGTTCCTGTCGCGCATAATGCTGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTTGTGGGTTCCCAGCTCATTGGTATTGTGGCAATTCCAGTGGAACAAATATACTCAGGGGAACAAGTTGAGGGAACTTACCCTATTCTGAACAATAACGGGAAACCATGTAAGCAAGGTGCTGTACTGAGCCTATCCATTCAGTACATCCCAATGGAGCAACTGAGCTTTTATCACAAAGGAGTTGGAGCAGGGCCTGAATATATAGGTGTTCCGGCTACTTATTTTCCTTTGAGGAAAGGTGGAAATGTTACTTTATATCAAGATGCTCATGTTCCAGATGGTAGCCTCCCGAATGTGTTGCTTGATAGTGGGATGTTTTATGTGCATGGAAAGTGTTGGCATGACATGTTCGATGCCATAAGACAAGCTCGCCGCTTGATTTATATTACAGGATGGTCAGTGTGGCACAAAGTTAGATTGGTAAGAGATGTCGGTTATGCATCCGATTACACATTGGGTGATCTTCTGAGGGCAAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGACGATCCTACATCAAGAAGTATTTTAGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTAGACGATTTTTCAAGCACTCATCAGTGAATGTGCTGCTCTGTCCTCGCAGTGCTGGAAAACGCCATAGCTGGGTCAAGCAAAAGGAAGTTGGAACTATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAACAACAGAAGAAAAATTGTAGCGTTTGTTGGTGGACTTGATTTATGTGATGGCCGATATGATACTCCTCACCATCCTCTCTTTAAGACATTACAAACAATACATAAGGATGACTATCACAACCCAACGTACACGGGTAACACTGGTGGTTGTCCAAGGGAGCCATGGCATGATTTGCATACTAAAATTGATGGTCCGGCAGCTTATGATGTCTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCCTCAAAACCACAAGGGATAAAGAAGTTGAAAATTTCATATGATGACGCTTTACTTAGACTGGAAAGAATTCCCGACGTTATTGGCATTAACGACACTCCTAGTGGTGACGATGATCCTGAATCATGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCAGTTAAGGGATTTCCAAAAGACCCAAGAGAGGCAACTGGCAAGAACCTTGTATGTGGGAAGAATGCGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATCGAGAATCAATATTTCATTGGGTCTTCTTACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATTCCGATGGAAATTGCTCTAAAGATAGCAGAAAAGATTAGAGCAAATGAGAGGTTTGCCGTTTATATAGTTATTCCAATGTGGCCTGAAGGTGTTCCAACAGGTAATGCCACGCAAAGGATTCTATTCTGGCAGAATAAAACAATGCAAATGATGTATGAAACAATTTACAAGGCTTTAGTTGAGGTTGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGTAATCGAGAGGTCATAAATATGTACGAAAATGTCAATGTATCAGGAAATCCTCCCCCAGCAAATAGTCCACAAGCAAATAGTCGAAATAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATTGTGGGATCTGCGAACATTAACCAACGCTCTATGGAAGGAACAAGGGACAGCGAGATTGCAATGGGAGCATACCAACCTCATCATACCTGGGCGAGAAAATATTCCTATCCACTTGGACAAATACATGGATATAGGATGTCACTTTGGGCAGAACATACTGGAACACTTGACGACTGCTTCTTGCAACCTGAGAGCCTTGAATGCGTACGAAAAGTTAGAGCAATTGGTGAAATGAACTGGAAACAATTTGCAGCAAGTGAATTATCAGAGATGAGAGGGCATCTTCTAAAATACCCTGTAGATGTTGATCGAAAGGGGAAAGTCAGATCACTTCCCGGTCAAGAAGAGTTTCCTGATGTAGGAGGGAAAATTGTTGGATCTTTTCTTGCCATGAAGGAGAATCTTACCATTTAA 3471 0.4186 MDNNYGSSSPYRYPNPYMYPPNPNPNPNRSPNPHQPYPPQASVPDPYAHAHQQYPPPDPYAHAHQTYPPPDAYAHQPYPPPDAHAHAPPYPYPYVSSHSLNYSYARSPPLSSSPSSNSNAPAPYEYPYPPPPHQLVPSPSAPPSYPSYPYHVAPGTHNPPRPSLSHHASLLQHGSASHRYYYPHNAPHEERPDVHSRHNSFSGHYWHDTSSSTALGGGGGGGGGGLQSSGGDNSKPSYPRLDELMNNVKLSDNQSTAPASPPAPAAQPFMHSVSVPKNQQKKEDFYGHSNNSFSGWGSSYSNRVNSGRLSDYSGSFNDSMHSQSLQVVPVLNKGSLKVLLLHGNLDIWVHDAKNLPNMDMFHRTLGDMFGKLPGGVSNKIEGTMNKKITSDPYVSISVSNAVIGRTFVISNSENPVWTQHFYVPVAHNAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGEQVEGTYPILNNNGKPCKQGAVLSLSIQYIPMEQLSFYHKGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGSLPNVLLDSGMFYVHGKCWHDMFDAIRQARRLIYITGWSVWHKVRLVRDVGYASDYTLGDLLRAKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVNVLLCPRSAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPHHPLFKTLQTIHKDDYHNPTYTGNTGGCPREPWHDLHTKIDGPAAYDVLTNFEERWLKASKPQGIKKLKISYDDALLRLERIPDVIGINDTPSGDDDPESWHVQIFRSIDSNSVKGFPKDPREATGKNLVCGKNALIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGNATQRILFWQNKTMQMMYETIYKALVEVGLEAAFSPQDYLNFFCLGNREVINMYENVNVSGNPPPANSPQANSRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKYSYPLGQIHGYRMSLWAEHTGTLDDCFLQPESLECVRKVRAIGEMNWKQFAASELSEMRGHLLKYPVDVDRKGKVRSLPGQEEFPDVGGKIVGSFLAMKENLTI 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01427 1156 MobiDBLite consensus disorder prediction 14 43 - -
Vifa5g01427 1156 Gene3D C2 domain 338 482 IPR035892 -
Vifa5g01427 1156 ProSiteProfiles C2 domain profile. 321 467 IPR000008 -
Vifa5g01427 1156 Pfam Phospholipase D C terminal 1076 1146 IPR024632 -
Vifa5g01427 1156 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1002 1029 IPR001736 GO:0003824
Vifa5g01427 1156 MobiDBLite consensus disorder prediction 123 156 - -
Vifa5g01427 1156 MobiDBLite consensus disorder prediction 1 240 - -
Vifa5g01427 1156 FunFam Phospholipase D delta 338 485 - -
Vifa5g01427 1156 Pfam C2 domain 343 469 IPR000008 -
Vifa5g01427 1156 SUPERFAMILY Phospholipase D/nuclease 546 767 - -
Vifa5g01427 1156 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 341 491 IPR035892 -
Vifa5g01427 1156 Gene3D Endonuclease Chain A 548 782 - -
Vifa5g01427 1156 SMART C2_3c 344 466 IPR000008 -
Vifa5g01427 1156 FunFam Phospholipase D delta 544 782 - -
Vifa5g01427 1156 SMART pld_4 1002 1029 IPR001736 GO:0003824
Vifa5g01427 1156 SMART pld_4 668 703 IPR001736 GO:0003824
Vifa5g01427 1156 Gene3D Endonuclease Chain A 817 1056 - -
Vifa5g01427 1156 CDD C2_plant_PLD 337 490 - -
Vifa5g01427 1156 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 668 703 IPR001736 GO:0003824
Vifa5g01427 1156 Pfam Phospholipase D Active site motif 1003 1029 IPR001736 GO:0003824
Vifa5g01427 1156 Pfam Phospholipase D Active site motif 669 703 IPR001736 GO:0003824
Vifa5g01427 1156 PANTHER PHOSPHOLIPASE D 333 1147 IPR015679 -
Vifa5g01427 1156 MobiDBLite consensus disorder prediction 72 88 - -
Vifa5g01427 1156 SUPERFAMILY Phospholipase D/nuclease 848 1088 - -
Vifa5g01427 1156 MobiDBLite consensus disorder prediction 96 122 - -
Vifa5g01427 1156 MobiDBLite consensus disorder prediction 183 202 - -
Vifa5g01427 1156 FunFam Phospholipase D 815 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01427 Vifa-Chr5 423574974 423585377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01427 224 1156 Phospholipase D Gene Family (Wang group) AT2G42010 74.428 0.0 1467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01427 K01115 - gmx:100801286 1781.92