Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01426 ATGATACTACTCAACTCCGATAATCAAGGCGAAGAGCTTCTCTCCGACGCTCACGTCTTACCAGCTTCAATTTCATTCCTAGGAACAAGATATGGCAACATTGCACCAATCATGGCAGCATTTTCTTCTAGAGGACCGAGTATCGTAGGACTGGATGTCATCAAACCAGACATAACTGCACCTGGTGTTAACATCTTAGCTTCATGGCCAACAAAAACAAGTCCAAGCATGATCAAATCAGACAAAAGAAGAGTCTTATTCAACATAATTTCAGGTACTTCAATGTCTTGTCCTCACGTTAGCGGCATCGCAGCATTGATTAAATCAGTTCATAAAGACTGGTCACCTGCAATGATCAAGTCATCTCTTATGACAACAGCTTACACATTGAACAACAAAAATCTCCCCATTTCCGATCTTGCTTCAAATAACAACTCATCTTCTGCTAACCCTTTTGCATTTGGTTCAGGACATGTTAATCCCGAAAGTGCCTCTGATCCTGGATTAGTCTATGATATGAACACCAATGACTATTTGAATTACTTTTGCAGCCTTAACTTTACATCTTCAGAGATTGCTATATTGACAAAAACTAACTTCACATGCTCTCAAAAACATGTTGTTCAAGTCGGTGACATGAATTATCCTTCATTTTCTGTTTTGTTTAGCAGAACAGTGCAGAATGTGACATATAAAAGAGTTGTTACAAATGTTGGAAAATCAGAAAGTGGTTATTATGAAGCTAAAGTTGAAGACCCTAATGGAGTTGTTGTTAATGTTGAACCAAGGAAATTGAAGTTTGAAAAATTGGGTCAGAAATTAAGCTATAAAGTTACATTTTTAGCAGTTGGAAAAACAAGAGTTGTTGGTAGTTCATCATTTGGATCACTCATTTGGGTTTCTGGTAAATATAAAGTTAGAAGTCCTATTGCAGTAACATGGCAATAG 948 0.3724 MILLNSDNQGEELLSDAHVLPASISFLGTRYGNIAPIMAAFSSRGPSIVGLDVIKPDITAPGVNILASWPTKTSPSMIKSDKRRVLFNIISGTSMSCPHVSGIAALIKSVHKDWSPAMIKSSLMTTAYTLNNKNLPISDLASNNNSSSANPFAFGSGHVNPESASDPGLVYDMNTNDYLNYFCSLNFTSSEIAILTKTNFTCSQKHVVQVGDMNYPSFSVLFSRTVQNVTYKRVVTNVGKSESGYYEAKVEDPNGVVVNVEPRKLKFEKLGQKLSYKVTFLAVGKTRVVGSSSFGSLIWVSGKYKVRSPIAVTWQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01426 315 Gene3D - 182 314 - -
Vifa5g01426 315 FunFam Subtilisin-like protease SBT1.5 182 315 - -
Vifa5g01426 315 Pfam Subtilase family 38 155 IPR000209 GO:0006508|GO:0008236
Vifa5g01426 315 ProSiteProfiles Serine proteases, subtilase domain profile. 1 165 - -
Vifa5g01426 315 Gene3D - 22 31 - -
Vifa5g01426 315 Pfam Fibronectin type-III domain 212 312 IPR041469 -
Vifa5g01426 315 SUPERFAMILY Subtilisin-like 30 169 IPR036852 GO:0004252|GO:0006508
Vifa5g01426 315 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 312 IPR045051 -
Vifa5g01426 315 Gene3D Peptidase S8/S53 domain 32 178 IPR036852 GO:0004252|GO:0006508
Vifa5g01426 315 ProSitePatterns Serine proteases, subtilase family, serine active site. 92 102 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01426 Vifa-Chr5 423221569 423222585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01426 1 315 Subtilisin-like Serine Gene Family AT1G01900 54.252 1.39e-110 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01426 - - gmx:100790006 458.759