Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01425 ATGATACTACTCAACTCCGATAATCAAGGCGAAGAGCTTCTCTCCGACGCTCACGTCTTACCAGGAACAAGATATGGCAACATTGCACCAATCATGGCAGCATTTTCTTCTAGAGGACCGAGTATCGTAGGACTGGATGTCATCAAACCAGACATAACTGCACCTGGTGTTAACATCTTAGCTTCATGGCCAACAAAAACAAGTCCAAGCATGATCAAATCAGACAAAAGAAGAGTCTTATTCAACATAATTTCAGGTACTTCAATGTCTTGTCCTCACGTTAGCGGCATCGCAGCATTGATTAAATCAGTTCATAAAGACTGGTCACCTGCAATGATCAAGTCATCTCTTATGACAACAGCTTACACATTGAACAACAAAAATCTCCCCATTTCCGATCTTGCTTCAAATAACAACTCATCTTCTGCTAACCCTTTTGCATTTGGTTCAGGACATGTTAATCCCGAAAGTGCCTCTGATCCTGGATTAGTCTATGATATGAACACCAATGACTATTTGAATTACTTTTGCAGCCTTAACTTTACATCTTCAGAGATTGCTATATTGACAAAAACTAACTTCACATGCTCTCAAAAACATGTTGTTCAAGTCGGTGACATGAATTATCCTTCATTTTCTGTTTTGTTTAGCAGAACAGTGCAGAATGTGACATATAAAAGAGTTGTTACAAATGTTGGAAAATCAGAAAGTGGTTATTATGAAGCTAAAGTTGAAGACCCTAATGGAGTTGTTGTTAATGTTGAACCAAGGAAATTGAAGTTTGAAAAATTGGGTCAGAAATTAAGCTATAAAGTTACATTTTTAGCAGTTGGAAAAACAAGAGTTGTTGGTAGTTCATCATTTGGATCACTCATTTGGGTTTCTGGTAAATATAAAGTTAGAAGTCCTATTGCAGTAACATGGCAATAG 930 0.3731 MILLNSDNQGEELLSDAHVLPGTRYGNIAPIMAAFSSRGPSIVGLDVIKPDITAPGVNILASWPTKTSPSMIKSDKRRVLFNIISGTSMSCPHVSGIAALIKSVHKDWSPAMIKSSLMTTAYTLNNKNLPISDLASNNNSSSANPFAFGSGHVNPESASDPGLVYDMNTNDYLNYFCSLNFTSSEIAILTKTNFTCSQKHVVQVGDMNYPSFSVLFSRTVQNVTYKRVVTNVGKSESGYYEAKVEDPNGVVVNVEPRKLKFEKLGQKLSYKVTFLAVGKTRVVGSSSFGSLIWVSGKYKVRSPIAVTWQ 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01425 309 Pfam Fibronectin type-III domain 206 306 IPR041469 -
Vifa5g01425 309 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 306 IPR045051 -
Vifa5g01425 309 FunFam Subtilisin-like protease SBT1.5 176 309 - -
Vifa5g01425 309 SUPERFAMILY Subtilisin-like 29 163 IPR036852 GO:0004252|GO:0006508
Vifa5g01425 309 ProSitePatterns Serine proteases, subtilase family, serine active site. 86 96 IPR023828 -
Vifa5g01425 309 ProSiteProfiles Serine proteases, subtilase domain profile. 1 159 - -
Vifa5g01425 309 Gene3D Peptidase S8/S53 domain 26 172 IPR036852 GO:0004252|GO:0006508
Vifa5g01425 309 Gene3D - 176 308 - -
Vifa5g01425 309 Pfam Subtilase family 32 149 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01425 Vifa-Chr5 423221569 423222585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01425 1 309 Subtilisin-like Serine Gene Family AT1G01900 53.372 2.10e-107 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01425 - - gmx:100790006 447.203