Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01424 ATGTCGTACAACATTATTCCTTATCCTAGTAAAAACATAGGCATCATGAAGTTTAGGAGAGTATTTTTATTCCTGGCTCTTATGGCGACGAATTCAATCGCGCTCGGGGCGCAACAAACCTATATAGTCCACATGGACAAGTCCAAAATTGAAGGCTCAATTCATTCTCAAGATAGCACAAAAGCATGGTCTGAATCAATCATTGATTTCATTACTCAAGCTTCAATGGAGGGAGAAGAGCTAGAAGATGTTCTATCACCTCAGCTTCTATATGCTTACGAAACCAACATGTTTGGTTTTGCAGCCACACTTTCTGAGAAACAACTTAAACACTTAAGCCAAATTGATGGTTTCCTTTCAGCCATGCCAGATGAACTATCAACACTCGATACGACACATACTCCAAATTTTCTTGGCCTAACAAATGGAAAAGGACTTTGGAGTGCTCCGAGTTTGGCCTCCGATGTGATCATCGGTGTCCTTGATTCGGGAATATGGCCCGAACACATCAGTTTCAACGACTCGGGCTTTTCCCCGATCCCTCGTAAATGGAAAGGTGTCTGTCAACAAGGCACAAAATTCACATCCTCAAATTGTAACAAGAAGCTTATTGGGGCAAGATACTATTTCAAAGGGTACGAAAAATTCATCGGAAAAATCAACGAAACAACCGATTATCTTTCTGCTAGAGACACTCAAGGGCATGGAACACACACTGCGTCGACCGCAGCCGGTAACTCTCTTCAAAATGCAAACATTTTTGGACTTGCTAAAGGTTCAGCCACTGGAATGAGGCGTACATCAAGAATCGCGGCTTATAAAGTTTGCTGGCTTTCTGGCTGCGCGAATTCCGACCTATTAGCAGCCATGGACCAAGCAGTTTCGGACGGTGTTGATGTACTTTCACTATCTTTAGGAAGTATTCCAAAACCATTTTATAATGACAGTATTGCTATAGCTTCATTCGGAGCAATGAAAAACGGCGTTTTTGTTTCTTGCTCAGCAGGCAACTCAGGCCCTTTTGCATCAACAGTGGGAAACGGCGCACCGTGGATCATGACAGTTGCTGCTAGCTACATTGACAGAACTTTTCCAACACAGCAGGTAAAAAGAGAGAGGCAATGTTTTGCACAAAAGGTTCACTTGATAAAACACTTGTTTTCGGAAAAATCGTTGTCTGTGAAAGAGGAATTAATGGTAGAACCGAAAAAGGCGAGGTAG 1221 0.4251 MSYNIIPYPSKNIGIMKFRRVFLFLALMATNSIALGAQQTYIVHMDKSKIEGSIHSQDSTKAWSESIIDFITQASMEGEELEDVLSPQLLYAYETNMFGFAATLSEKQLKHLSQIDGFLSAMPDELSTLDTTHTPNFLGLTNGKGLWSAPSLASDVIIGVLDSGIWPEHISFNDSGFSPIPRKWKGVCQQGTKFTSSNCNKKLIGARYYFKGYEKFIGKINETTDYLSARDTQGHGTHTASTAAGNSLQNANIFGLAKGSATGMRRTSRIAAYKVCWLSGCANSDLLAAMDQAVSDGVDVLSLSLGSIPKPFYNDSIAIASFGAMKNGVFVSCSAGNSGPFASTVGNGAPWIMTVAASYIDRTFPTQQVKRERQCFAQKVHLIKHLFSEKSLSVKEELMVEPKKAR 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01424 406 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 373 IPR045051 -
Vifa5g01424 406 Pfam Peptidase inhibitor I9 40 126 IPR010259 -
Vifa5g01424 406 Gene3D Peptidase S8/S53 domain 155 360 IPR036852 GO:0004252|GO:0006508
Vifa5g01424 406 CDD Peptidases_S8_3 128 358 IPR034197 -
Vifa5g01424 406 Gene3D - 361 374 - -
Vifa5g01424 406 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Vifa5g01424 406 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 130 IPR037045 -
Vifa5g01424 406 PRINTS Subtilisin serine protease family (S8) signature 231 244 IPR015500 -
Vifa5g01424 406 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Vifa5g01424 406 SUPERFAMILY Subtilisin-like 134 364 IPR036852 GO:0004252|GO:0006508
Vifa5g01424 406 ProSiteProfiles Serine proteases, subtilase domain profile. 135 406 - -
Vifa5g01424 406 Pfam Subtilase family 154 361 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01424 Vifa-Chr5 423218694 423221545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01424 38 365 Subtilisin-like Serine Gene Family AT1G01900 56.667 3.14e-127 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01424 - - lja:Lj0g3v0335989.1 580.867