Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01423 ATGGTTTTACAGAAACATACCAAATTGTTTCCTTTTCTTTGCCTTCAATTGTTTCTACTCGTCTCGCTAAGCATTGGTTCTTCGGTTCATGGAGTTGATCAAAAGAACTTTTACATTGTTTTCTTGGGAGCGAAACCTATAAGCCGAGACGTTGCGATTAAGACTCATTTAAATGTTCTATCTTCTGTCAAGGGAAGCTATCGTGAAGCCGAAGAGTCCATTGTATATAGTTACACTGAGAGCTTCAACGCATTTGCTGCAAAACTGTCTCAACATGAAGCCGAAAAGTTATCTGACATGAATGAAGTTGTTTTGGTGTTTAAAAATCGGTATCGTAAGCTACACACAACAAGATCGTGGAACTTCATTGGTTTGCCTCTCACTGCTAAGAGAAGATTGAAATTAGAACGCGACATCGTTGTTGGTCTTTTGGACACAGGGATCACGCCGGAGTCAAAAAGCTTCAAAGATGATGGATTAGGTCCTCCACCAGCAAGATGGAAAGGAACTTGTGGCCACTATGCTAATTTCTCAGGCTGCAACAACAAGATCATAGGAGCCAAATACTTCAAGGCTGATAAAAACCCTGATCCATCCGACATATTATCACCGATAGACGTTGACGGTCACGGAACTCACACTGCATCAACAGCAGCAGGTGATTTAGTGCCAAATGCAAGTCTCTTTGGATTGGCCAATGGAACTTCGCGCGGTGCCGTGCCATCAGCTAGGTTGGCAATTTACAAAGTCTGTTGGTCATCAAGTGGATGTGCAGACATGGACATACTTGCTGCATTTGATGCTGCTATACATGATGGTGTCGATGTCATATCAATTTCCATAGGTGGAGGAAGTTTTGATTATGTTCATGACCCTATATCAATCGGCGCGTTTCATGCCATGAGGAAAGGTATAATCACTGTTGCATCAGCTGGAAATGATGGTCCAAGTATGGCAACTGTGACAAACACTGCACCATGGATTGTCACAGTAGCTGCTAGCGGCATCGATAGAACTTTCAAGAGCACTGTACAATTGGGGAGCGGAAAAAATGTTTCTGGAATAGGAATTAGTTGTTTCAATCCAAAACAAAACCAGTACACTATTATTAACGGGATTGATGCTGCGAAAGACTCGAAAAGCAAGGAAGATGCCAAATCATGCTTCTCAGGCTCCTTACAGGAAGATAAGGTGAAGGGAAAGCTTGTTTACTGCGTAGGATCATGGGGGACTGAAGCTAATGTGAGAGAAATCGGAGGCATTGGCGCTGTAATAGAATACGACAGTTATCCCGACGTTGCTCAAATTTCCATGGCTCCTGCTACTATTGTCAACCATAGCATAGGTGAAACTGTTACCAATTATATCAAATCCACAAGATCGCCATCGGCAGTAATATACAAGAGTCGTGAAGAAAAAGTGCAAGCTCCATTTACTGCTACATTCTCATCTCGAGGACCGAATCCAGGATCCAAACATATCCTCAAGCCTGACTTAGCAGCTCCTGGAATCGACATCTTAGCGTCTTATACTCTTAGAAAATCACTCACTGGTTTGACAGGAGATAAACAATTTTCAGAATTTTCTATAATATCCGGAACTTCCATGGCATGTCCGCATGTAGCCGGAGTAGCAGCATATGTGAAGTCATTTCATCCCAATTGGACTCCTGCTGCAATCAGATCCGCTATTATCACGACCGCGAAACCTATGAGTAAAAGAATTAACAACGAAGCAGAATTTGCGTTTGGTTCTGGTCAACTAAACCCAACAAGAGCAGTTTCTCCTGGTCTAATCTACGACATGGATGACTTCGGTTATATCCAATTTCTATGCCACGAAGGTTACAAAGATTCAAGTTTATCGGCCCTAGTTGGTTCTCGTATAAATTGTTCGTCTATACTTCCTGGACTTGGCCATGATGCTATAAACTATCCAACCATGCAACTTAGCTTGGAAAGCAAGAAACACGCAACCGTTTTTAGAAGAACGGTTACGAATGTAGGTCCTGTTCCGATTATCTACAACGCTACTATTAGATCGCCAAAAGGAGTTGAAATCACAGTGAAGCCTAGTTTTCTTAGTTTTGATACAAAGATGCACAAGAGGAGCTTTGAAGTGGTTGTGAAAGTAAAATCTATTGCAAGTATGGAGATTCTATCAGGTTCACTTATATGGAGAAGTCCACGTTACATTGTTAGAAGTCCTATAGTTATTTACAAGCCATAA 2229 0.4181 MVLQKHTKLFPFLCLQLFLLVSLSIGSSVHGVDQKNFYIVFLGAKPISRDVAIKTHLNVLSSVKGSYREAEESIVYSYTESFNAFAAKLSQHEAEKLSDMNEVVLVFKNRYRKLHTTRSWNFIGLPLTAKRRLKLERDIVVGLLDTGITPESKSFKDDGLGPPPARWKGTCGHYANFSGCNNKIIGAKYFKADKNPDPSDILSPIDVDGHGTHTASTAAGDLVPNASLFGLANGTSRGAVPSARLAIYKVCWSSSGCADMDILAAFDAAIHDGVDVISISIGGGSFDYVHDPISIGAFHAMRKGIITVASAGNDGPSMATVTNTAPWIVTVAASGIDRTFKSTVQLGSGKNVSGIGISCFNPKQNQYTIINGIDAAKDSKSKEDAKSCFSGSLQEDKVKGKLVYCVGSWGTEANVREIGGIGAVIEYDSYPDVAQISMAPATIVNHSIGETVTNYIKSTRSPSAVIYKSREEKVQAPFTATFSSRGPNPGSKHILKPDLAAPGIDILASYTLRKSLTGLTGDKQFSEFSIISGTSMACPHVAGVAAYVKSFHPNWTPAAIRSAIITTAKPMSKRINNEAEFAFGSGQLNPTRAVSPGLIYDMDDFGYIQFLCHEGYKDSSLSALVGSRINCSSILPGLGHDAINYPTMQLSLESKKHATVFRRTVTNVGPVPIIYNATIRSPKGVEITVKPSFLSFDTKMHKRSFEVVVKVKSIASMEILSGSLIWRSPRYIVRSPIVIYKP 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01423 742 FunFam Subtilisin-like protease SBT1.5 138 370 - -
Vifa5g01423 742 Gene3D - 611 741 - -
Vifa5g01423 742 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Vifa5g01423 742 FunFam Subtilisin-like protease SBT5.3 27 115 - -
Vifa5g01423 742 ProSiteProfiles Serine proteases, subtilase domain profile. 119 594 - -
Vifa5g01423 742 CDD Peptidases_S8_3 113 568 IPR034197 -
Vifa5g01423 742 Gene3D - 337 472 - -
Vifa5g01423 742 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 69 738 IPR045051 -
Vifa5g01423 742 SUPERFAMILY Subtilisin-like 114 598 IPR036852 GO:0004252|GO:0006508
Vifa5g01423 742 Pfam Subtilase family 137 585 IPR000209 GO:0006508|GO:0008236
Vifa5g01423 742 Pfam Peptidase inhibitor I9 38 115 IPR010259 -
Vifa5g01423 742 CDD PA_subtilisin_like 343 466 - -
Vifa5g01423 742 Gene3D Peptidase S8/S53 domain 138 604 IPR036852 GO:0004252|GO:0006508
Vifa5g01423 742 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Vifa5g01423 742 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Vifa5g01423 742 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Vifa5g01423 742 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 115 IPR037045 -
Vifa5g01423 742 Pfam Fibronectin type-III domain 643 739 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01423 Vifa-Chr5 423195851 423199254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01423 35 582 Subtilisin-like Serine Gene Family AT4G00230 65.938 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01423 - - gmx:100795950 1150.58