Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01414 ATGCCCAAAACATCACCACCACCAATGACGCCGTATCTCACGGTACTCCTCCTATTCACCACCATCTCCGCCACCGCCGCCGCAACCGAATACAAAAACCACACCGTAGGCGGCACATCTGGATGGTTCTTCAACTCCACAACCAACACCCCCGCCACAAACTACTCCTCTTGGGCTTCCACTCAAATTTTCAACCTTGGCGATTATCTCATTTTCAACACGAATTCAAACCAGAGCGTGATTCTCACCTACAACAACACCGTATATTTGAACTGCACCGCCGATGATTCCGACAACGGAACATTCATATACAGCAGCGGAACTTTCAACCAGACGTTGACTATTCCCGTTCCGTTGACTATTGTGGGACTCAACTACTTCTTCTCCGACACTAGCGACGGTGTTCAGTGTCAGCACGGCTTGGCGTTTGAGATCCAGGTTCAGCGTGGAATTGGCTTGCCGCCGAGTCTTAATCAGCCTCCTCCGCCGCCGTATAAAGAGCCGCCTGGTCCTGATAGTGCTGAATCTCCGACGGTTACGATAGCGGAAGAGCCGAAAAATGGCGCGTTAGTGAAACGCGCTGACGTGCGCGTGGTGGTTTATGGGTTATGTGTAGTGATGGTGTTGTTCCAATTTTTGTGA 642 0.5093 MPKTSPPPMTPYLTVLLLFTTISATAAATEYKNHTVGGTSGWFFNSTTNTPATNYSSWASTQIFNLGDYLIFNTNSNQSVILTYNNTVYLNCTADDSDNGTFIYSSGTFNQTLTIPVPLTIVGLNYFFSDTSDGVQCQHGLAFEIQVQRGIGLPPSLNQPPPPPYKEPPGPDSAESPTVTIAEEPKNGALVKRADVRVVVYGLCVVMVLFQFL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01414 213 Pfam Plastocyanin-like domain 49 140 IPR003245 GO:0009055
Vifa5g01414 213 PANTHER BLUE COPPER PROTEIN 29 160 IPR039391 GO:0009055
Vifa5g01414 213 FunFam Early nodulin-like protein 18 31 150 - -
Vifa5g01414 213 MobiDBLite consensus disorder prediction 153 178 - -
Vifa5g01414 213 Gene3D - 30 149 IPR008972 -
Vifa5g01414 213 MobiDBLite consensus disorder prediction 155 171 - -
Vifa5g01414 213 ProSiteProfiles Phytocyanin domain profile. 32 149 IPR003245 GO:0009055
Vifa5g01414 213 SUPERFAMILY Cupredoxins 32 148 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01414 Vifa-Chr5 419808763 419809617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01414 7 201 Phytocyanin Superfamily AT1G08500 36.408 4.70e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01414 - - psat:127127184 356.295