Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01410 ATGGAGTACCAAACGCTTCTCCTACTTATTACTTTTGTGTGTGCTACCATTCTCATCTTCATTCTTAGAAAATTAAACCAAACTCAAATTTCTACTAAACTTCCACCAGGGCCACACCCACTTCCCATCATTGGTAACATCTTAGAACTTGGTAAAAACCCACACAAATCTCTCACAAAACTCTCTAAAATCTATGGACCAATCATGACACTAAAGTTAGGAACAATAACAACCATAGTAATCTCATCCCCTCAAGTAGCCAAACAAGTCTTACAAGAAAATTCACAAATTTTTTCTAGTAGAAGTATTCCACATGCTGGCTATGCACTTGATCATCACAAATTCTCACCTGCATGGCTTCCAACAATAGACTTGTGGAAGAAACTAAGAAAAATTTGTGCCACAAAAGTATTTTCTACAAAAATGCTAGATTCAACAAAAAATTTGCGCCAACAAAAGTTGCAAGAATTATTAGATTATGTGAATGAAAAAATCCAGAAAGGCGAGGCTATTGATATTGGTGAGGCTGTTTTTACAACTGTCCTTAATTCAATTTCAAACACTTTGTTCTCTGTGGATTTGGCTCATTCAATCCATGGCCAAGAGTCTCAAGAATTTAAGAAAATTATTTGGGGTATCATGGAAGAAGCTGGGAAGCCTAATGTTTCAGATTTCTTTCCCATCCTTCGTCCCTTAGATCTACAAAGTGTGTATGCAAAGACCACCAAACATTTGAAGAAGTTATATGATATTCTTGATGAAATTATTGAAGAAAGAATTAGTACAAGATCTACCAAAGCTGATTCTGGGGATGTTTGCAATGATGTGTTGGATTCACTTCTTAAGAGCAACAATATTGGAGAAACCACTCTGGAATTAAGCCGCGATGAGATGGTGCATCTGTTTATGGATTTATTTGTTGCTGGGATTGACACAACATCAGGCACAATTGAATGGATTATGACAGAGTTATTACGTAATCCTGAAAAATTAAGAAAAGCACAAAAAGAGGTATGTCAAGAAATTGATAAAGAAGAAACGATTGAAGAATCGCATATTTCCAAATTACTTTTCTTACAAGCAATTGTGAAGGAAACTTTTCGGTTGCACCCAAGTGCTCCATTATTGCTACCCCACAAATGTGATGAAACTGTTCAGATATTAGGCTTCAATGTGCCAAAAAATGCACAAATAATAGTTAATGTATGGGCCATGGGAAGAGATCCAACTATTTGGGAAAATCCAAATATATTTATACCCGAAAGATTTTTAGAGTGTGACATTAATTATAAGGGTAATAGTTTTGAGCTTATACCATTTGGGGCGAGCAAAAGAATTTGTCCAGGATTACCTTTGGCTCATAGGGTTATGCATTTAGTGGTGGCATCCCTTTTACGCAATTTTGAATGGAATCTTCCTGATGGGTTAAAGCCAGAAGAAGTAAATATGGAGGAGAAATTTGGAATAACTTTAAAGAAGTTTCAATCTCTACGACTTCAAGCTACTTCATCAGTTTAA 1518 0.357 MEYQTLLLLITFVCATILIFILRKLNQTQISTKLPPGPHPLPIIGNILELGKNPHKSLTKLSKIYGPIMTLKLGTITTIVISSPQVAKQVLQENSQIFSSRSIPHAGYALDHHKFSPAWLPTIDLWKKLRKICATKVFSTKMLDSTKNLRQQKLQELLDYVNEKIQKGEAIDIGEAVFTTVLNSISNTLFSVDLAHSIHGQESQEFKKIIWGIMEEAGKPNVSDFFPILRPLDLQSVYAKTTKHLKKLYDILDEIIEERISTRSTKADSGDVCNDVLDSLLKSNNIGETTLELSRDEMVHLFMDLFVAGIDTTSGTIEWIMTELLRNPEKLRKAQKEVCQEIDKEETIEESHISKLLFLQAIVKETFRLHPSAPLLLPHKCDETVQILGFNVPKNAQIIVNVWAMGRDPTIWENPNIFIPERFLECDINYKGNSFELIPFGASKRICPGLPLAHRVMHLVVASLLRNFEWNLPDGLKPEEVNMEEKFGITLKKFQSLRLQATSSV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01410 505 CDD CYP76-like 62 498 - -
Vifa5g01410 505 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 Gene3D Cytochrome P450 21 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 FunFam Cytochrome P450 76C4 26 500 - -
Vifa5g01410 505 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 Pfam Cytochrome P450 35 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g01410 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01410 Vifa-Chr5 418783391 418785964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01410 4 497 Cytochrome P450 AT2G45550 46.680 6.96e-162 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01410 - - cam:101504674 735.717