Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01386 ATGGCAGAAGGAAAAGGAAGAGTTTGTGTAACAGGAGGTACAGGTTTTATTGGTTCATGGATTATCAAGACACTTCTTGAAGATGGTTACACTGTTAATACCACTGTTAGAGCTGATCCAGAGAAAAAGAGAGATCTTAGCTTTCTCACAAATCTTCCGGGTGCATCTGAAAAATTAAAATTTTTCAATGCTGATCTTGACGATCCTGAAAGTTTCAATGAAGCAATTGAAGGGTGCGTTGGAATATTCCACACTGCTGCTTCGGTTGATTTTGAAGAGAAAGAACCAGAAGAAATAGTGACAAAAAGAAGCATTGATGGAGCTTTAGGAATTCTAAAAGCATGCAAAAACTCTAAGACATTGAAGAGAGTTGTTTACACTTCAAGTGCTTCAGCGGTTTATTGTCAAGACAAAGAAAAAGAAAAAGATGTAATGGACGAAAGTTATTGGAGTGATATAGACATTCTTAGAAATCATAAACCATTTGGTTGGGCTTATTCAGTTTCTAAGACACAAGCGGAGAAAGCTGTTCTTGAGTATGGACAACAAAATGGGTTGGATATTGTGACTGTTATACCAACTATTGTTGTTGGACCCTTCATTTGCCCTAAACTTCCTACCTCCGTTTATGGTGTACTACCTTACTTATTTGGGAGATATAATTGCTCACCATTCCTTGCAACTATTGAGGAAGTAGTTGACATCGTTTCTTCAAAGCATCCTGAATTTCAAATTCCAAAATCCAAATTGCTTGGGGGACCTAAAGGTCTTGAGCTTCCACATTTAACATCAAAGAAACTCATAGATGCTGGATTTGAATTCAAGCATACTATTGAAGAAACGTTTGAGGATGCGATTCAAAGTTGCAAGGAAAAGGGACTTCTTTAA 888 0.3716 MAEGKGRVCVTGGTGFIGSWIIKTLLEDGYTVNTTVRADPEKKRDLSFLTNLPGASEKLKFFNADLDDPESFNEAIEGCVGIFHTAASVDFEEKEPEEIVTKRSIDGALGILKACKNSKTLKRVVYTSSASAVYCQDKEKEKDVMDESYWSDIDILRNHKPFGWAYSVSKTQAEKAVLEYGQQNGLDIVTVIPTIVVGPFICPKLPTSVYGVLPYLFGRYNCSPFLATIEEVVDIVSSKHPEFQIPKSKLLGGPKGLELPHLTSKKLIDAGFEFKHTIEETFEDAIQSCKEKGLL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01386 295 Pfam NAD dependent epimerase/dehydratase family 8 218 IPR001509 -
Vifa5g01386 295 Gene3D - 5 295 - -
Vifa5g01386 295 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 285 - -
Vifa5g01386 295 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 290 IPR036291 -
Vifa5g01386 295 FunFam Dihydroflavonol reductase 5 218 - -
Vifa5g01386 295 CDD FR_SDR_e 8 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01386 Vifa-Chr5 399957564 399958716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01386 4 295 Monolignol Biosynthesis Gene Families AT2G02400 33.436 2.64e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01386 - K13265 gmx:102659875 411.764