Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01383 ATGGCAGAAGGAAAAGGAAGAGTTTGTGTAACAGGAGGTACAGGTTTTATTGGTTCATGGATTATCAAGACACTTCTTGAAGATGGTTACACTGTTAATACCACTGTTAGAGCTGATCCAGAGAAAAAGAGAGATCTTAGCTTTCTCACAAATCTTCCGGGTGCATCTGAAAAACTAAAATTTTTCAATGCTGATCTTGACGATCCTGAAAGTTTCAATGAAGCAATTGAAGGGTGCGTTGGAATATTCCACACTGCTGCTTCGGTTGATTTTGAAGAGAAAGAACCAGAAGAAATAGTGACAAAAAGAAGCATTGATGGCGCTTTAGGAATTCTAAAAGCATGCAAAAACTCTAAGACATTGAAGAGAGTTGTTTACACTTCAAGTGCTTCAGCGGTTTATTGTCAAGACAAAGAAAAAGAAAAAGATGTAATGGACGAAAGTTATTGGAGTGATATAGACATTCTTAGAAATCATAAACCATTTGGTTGGGCTTATTCAGTTTCTAAGACACAAGCGGAGAAAGCTGTTCTTGAGTATGGACAACAAAATGGGTTAGATATTGTGACTGTTATACCAACTATTGTTGTTGGACCCTTCATTTGCCCTAAACTTCCTACCTCTGTTTATGGTGTACTACCTTACTTATTTGGTAACACCGATAACAGTCCAATATCTCGTTTCCATATAGTGCATGTTGATGATATTGCACGAGCTCATATATTCTTACTTGAACATCCTAATCCAAAAGGGAGATATAATTGTTCACCATTCCTTGCAACTATTGAGGAAGTAGTTGACATCGTTTCTTCAAAGCATCCTGAATTTCAAATTCCAAAGTCCAAATTGCTTGGGGGACCTAAAGGTCTTGAGCTTCCACATTTAACATCAAAGAAACTCACAGATGCTGGATTTGAATTCAAGCATACTATTGAGGAAACGTTTGAGGATGCGATTCAAAGTTGCAAGGAAAAGGGAATTCTTTAA 987 0.3718 MAEGKGRVCVTGGTGFIGSWIIKTLLEDGYTVNTTVRADPEKKRDLSFLTNLPGASEKLKFFNADLDDPESFNEAIEGCVGIFHTAASVDFEEKEPEEIVTKRSIDGALGILKACKNSKTLKRVVYTSSASAVYCQDKEKEKDVMDESYWSDIDILRNHKPFGWAYSVSKTQAEKAVLEYGQQNGLDIVTVIPTIVVGPFICPKLPTSVYGVLPYLFGNTDNSPISRFHIVHVDDIARAHIFLLEHPNPKGRYNCSPFLATIEEVVDIVSSKHPEFQIPKSKLLGGPKGLELPHLTSKKLTDAGFEFKHTIEETFEDAIQSCKEKGIL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01383 328 CDD FR_SDR_e 8 305 - -
Vifa5g01383 328 Pfam NAD dependent epimerase/dehydratase family 8 254 IPR001509 -
Vifa5g01383 328 Gene3D - 5 328 - -
Vifa5g01383 328 FunFam Dihydroflavonol reductase 5 328 - -
Vifa5g01383 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 319 - -
Vifa5g01383 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 323 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01383 Vifa-Chr5 399586995 399588147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01383 4 328 Monolignol Biosynthesis Gene Families AT2G02400 36.503 1.17e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01383 - K13265 gmx:102659875 473.781