Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01336 ATGCTAACCCTCAATCTCAATGCTCTTTCTTCTTCGTTCTCAATTGTTCCCTTTCATGTCAATTATTCACTCTTTACTCAAACTCAAACTCAGTTATTAGCTCCCACTAATCTTAATTACCCTTTTCTTAATACAGCTACCAGAAAGTTCAACACTTTTCAGCTCAAGGCTGGATTTTGGGAGTCAATTAAATCTGGGTTGACCAAGAATAACACCATACAGGTTATTGATCCAGAGTTGGCAGAAGAAGAAGATGAAGAGCCTCTACCTCAAGAGTTTGTGCTTGTTGAGAAGACCGAACCTGATGGAACAATTGAACAGATAACGTTCTCTTCGGGTGGAGATATTGATGTTTATGATCTTCAAGCCCTCTGTGACAAGGTAGGGTGGCCTCGTAGGCCATTATCAAAATTAGCTGCTGCTTTGAAGAACAGTTATATGGTGGCCTGTCTCTATTCTATAAGAAAGTCGCCAGGGTCAGAGGGGAATGAACAAAAGATATTAATTGGCATGGCCCGTGCTACATCAGACCATGCCTTCAATGCCACAATTTGGGATGTTCTAGTTGATCCCGGCTACCAGGGTCAAGGTCTTGGCAAAGCTCTTGTAGAGAAACTAATTCGAGCTCTTTTGCAAAGGGACATTGGTAATATAACATTGTTTGCAGATAGTAAAGTTGTGGAATTTTATCGCAATTTAGGTTTTGAAGCTGACCCAGAGGGCATAAAAGGCATGTTTTGGTACCCAACTAATTAA 756 0.4087 MLTLNLNALSSSFSIVPFHVNYSLFTQTQTQLLAPTNLNYPFLNTATRKFNTFQLKAGFWESIKSGLTKNNTIQVIDPELAEEEDEEPLPQEFVLVEKTEPDGTIEQITFSSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYMVACLYSIRKSPGSEGNEQKILIGMARATSDHAFNATIWDVLVDPGYQGQGLGKALVEKLIRALLQRDIGNITLFADSKVVEFYRNLGFEADPEGIKGMFWYPTN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01336 251 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 117 240 IPR016181 -
Vifa5g01336 251 CDD NAT_SF 168 220 - -
Vifa5g01336 251 Gene3D - 112 248 - -
Vifa5g01336 251 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 108 251 IPR000182 GO:0016747
Vifa5g01336 251 Pfam Acetyltransferase (GNAT) family 117 235 IPR000182 GO:0016747
Vifa5g01336 251 PANTHER ACYL-COA N-ACYLTRANSFERASE 20 248 IPR045039 GO:0008080
Vifa5g01336 251 FunFam Putative acetyltransferase NSI 112 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01336 Vifa-Chr5 388293126 388300019 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa5g01336 Acetyltransf_1 2.8e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01336 K22450 - gmx:100799333 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01336 5 388293126 388300019 Vifa5g01336 5 388293126 388300019 ECH