Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01291 ATGGGAAACTACAGGTTCAGATTGTCTGATATGATGCCTAATGCTTGGTTTTACAAACTAAGAGACATGGGAAAAACAAGAAACCAAACACCAACATCTCAACAACATAGGAAGAAAAAACAATCTTCAACCTCAACGACCTCAAACACAACAAACTCATCATCATCAACATCAAAATCAAAGCAACCCTACCAAATCAATCCAAGAAAATCCTACTACTTCACAAGAGAGCTCAAGCAAACAAACAACAGAATCTACAACACTTCACCACTACAAAACAACACAAATTCCTCACCCGAGCCACCAAGAAAATCATCACCAAAACAAAGACCAAAAAGAAGAACACCAAAACCTTCATCATCATCATCTTCACATGATTCTCCACTACATAGTTCTGCAGAATCAGAATCACCTGATCCAGAAATCAGAACAGACCGTGTTCTTCTACCAACAAATGACATCATAATCGATGTCGACAACAATTCTCTTGTAGCAACAAGAAAAGATGATAAGCTTAAAGGGTACGATTCATTATCAGAACTCATGAAACTTCCACCAATTGTTACCAAACCAGAGAATCTCAGCTACTTGCTCAACTATGCAAAGAAGAAAGAAACAAAACCCAGAAGCAAAACTTCATCAAACGACGAACACAACGTTAAAGGGTCACTAAAAGTCAAGATTTTGAAGGAAGAACAGAGGTACACAAACTCAAACACACCAAGTAGAAGATTTTCTGTTAGTTCACCAGCTGTGAAGCTTAGGATCAATTCACCAAGAATCTCAAGCAAGAAAGTTCAAACACATGGCCGGAAAAGCGTGTCGTCGAACGGTAATCGGAGAAGCCTTTCTGATAGTTTCGCAATTGTGAAGTCATCGATGAATCCACAGAGGGATTTCAGAGAATCAATGGTGGAGATGATTGTTGAGAACAACATTAGAACATCAAAGGATTTGGAGGATCTTTTAGCTTGTTACCTTTCTTTGAATTCAGATGAGTATCATCAAGTTATTATCAAAGTGTTCAAGCAAATTTGGTTTGATTTGACTGATAATAATAAGTAG 1065 0.3765 MGNYRFRLSDMMPNAWFYKLRDMGKTRNQTPTSQQHRKKKQSSTSTTSNTTNSSSSTSKSKQPYQINPRKSYYFTRELKQTNNRIYNTSPLQNNTNSSPEPPRKSSPKQRPKRRTPKPSSSSSSHDSPLHSSAESESPDPEIRTDRVLLPTNDIIIDVDNNSLVATRKDDKLKGYDSLSELMKLPPIVTKPENLSYLLNYAKKKETKPRSKTSSNDEHNVKGSLKVKILKEEQRYTNSNTPSRRFSVSSPAVKLRINSPRISSKKVQTHGRKSVSSNGNRRSLSDSFAIVKSSMNPQRDFRESMVEMIVENNIRTSKDLEDLLACYLSLNSDEYHQVIIKVFKQIWFDLTDNNK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01291 354 MobiDBLite consensus disorder prediction 86 142 - -
Vifa5g01291 354 Pfam Transcriptional repressor, ovate 293 349 IPR006458 -
Vifa5g01291 354 MobiDBLite consensus disorder prediction 86 103 - -
Vifa5g01291 354 MobiDBLite consensus disorder prediction 204 225 - -
Vifa5g01291 354 MobiDBLite consensus disorder prediction 260 280 - -
Vifa5g01291 354 MobiDBLite consensus disorder prediction 26 68 - -
Vifa5g01291 354 ProSiteProfiles OVATE domain profile. 289 348 IPR006458 -
Vifa5g01291 354 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 351 IPR038933 GO:0045892
Vifa5g01291 354 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Vifa5g01291 354 NCBIfam uncharacterized plant-specific domain TIGR01568 288 350 IPR006458 -
Vifa5g01291 354 MobiDBLite consensus disorder prediction 116 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01291 Vifa-Chr5 375332457 375333521 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vifa5g01291 Ovate 5.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01291 - - aprc:113863721 380.563