Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g01291 | ATGGGAAACTACAGGTTCAGATTGTCTGATATGATGCCTAATGCTTGGTTTTACAAACTAAGAGACATGGGAAAAACAAGAAACCAAACACCAACATCTCAACAACATAGGAAGAAAAAACAATCTTCAACCTCAACGACCTCAAACACAACAAACTCATCATCATCAACATCAAAATCAAAGCAACCCTACCAAATCAATCCAAGAAAATCCTACTACTTCACAAGAGAGCTCAAGCAAACAAACAACAGAATCTACAACACTTCACCACTACAAAACAACACAAATTCCTCACCCGAGCCACCAAGAAAATCATCACCAAAACAAAGACCAAAAAGAAGAACACCAAAACCTTCATCATCATCATCTTCACATGATTCTCCACTACATAGTTCTGCAGAATCAGAATCACCTGATCCAGAAATCAGAACAGACCGTGTTCTTCTACCAACAAATGACATCATAATCGATGTCGACAACAATTCTCTTGTAGCAACAAGAAAAGATGATAAGCTTAAAGGGTACGATTCATTATCAGAACTCATGAAACTTCCACCAATTGTTACCAAACCAGAGAATCTCAGCTACTTGCTCAACTATGCAAAGAAGAAAGAAACAAAACCCAGAAGCAAAACTTCATCAAACGACGAACACAACGTTAAAGGGTCACTAAAAGTCAAGATTTTGAAGGAAGAACAGAGGTACACAAACTCAAACACACCAAGTAGAAGATTTTCTGTTAGTTCACCAGCTGTGAAGCTTAGGATCAATTCACCAAGAATCTCAAGCAAGAAAGTTCAAACACATGGCCGGAAAAGCGTGTCGTCGAACGGTAATCGGAGAAGCCTTTCTGATAGTTTCGCAATTGTGAAGTCATCGATGAATCCACAGAGGGATTTCAGAGAATCAATGGTGGAGATGATTGTTGAGAACAACATTAGAACATCAAAGGATTTGGAGGATCTTTTAGCTTGTTACCTTTCTTTGAATTCAGATGAGTATCATCAAGTTATTATCAAAGTGTTCAAGCAAATTTGGTTTGATTTGACTGATAATAATAAGTAG | 1065 | 0.3765 | MGNYRFRLSDMMPNAWFYKLRDMGKTRNQTPTSQQHRKKKQSSTSTTSNTTNSSSSTSKSKQPYQINPRKSYYFTRELKQTNNRIYNTSPLQNNTNSSPEPPRKSSPKQRPKRRTPKPSSSSSSHDSPLHSSAESESPDPEIRTDRVLLPTNDIIIDVDNNSLVATRKDDKLKGYDSLSELMKLPPIVTKPENLSYLLNYAKKKETKPRSKTSSNDEHNVKGSLKVKILKEEQRYTNSNTPSRRFSVSSPAVKLRINSPRISSKKVQTHGRKSVSSNGNRRSLSDSFAIVKSSMNPQRDFRESMVEMIVENNIRTSKDLEDLLACYLSLNSDEYHQVIIKVFKQIWFDLTDNNK | 354 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g01291 | 354 | MobiDBLite | consensus disorder prediction | 86 | 142 | - | - | |
Vifa5g01291 | 354 | Pfam | Transcriptional repressor, ovate | 293 | 349 | IPR006458 | - | |
Vifa5g01291 | 354 | MobiDBLite | consensus disorder prediction | 86 | 103 | - | - | |
Vifa5g01291 | 354 | MobiDBLite | consensus disorder prediction | 204 | 225 | - | - | |
Vifa5g01291 | 354 | MobiDBLite | consensus disorder prediction | 260 | 280 | - | - | |
Vifa5g01291 | 354 | MobiDBLite | consensus disorder prediction | 26 | 68 | - | - | |
Vifa5g01291 | 354 | ProSiteProfiles | OVATE domain profile. | 289 | 348 | IPR006458 | - | |
Vifa5g01291 | 354 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 52 | 351 | IPR038933 | GO:0045892 | |
Vifa5g01291 | 354 | Pfam | DNA-binding domain | 1 | 43 | IPR025830 | GO:0003677 | |
Vifa5g01291 | 354 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 288 | 350 | IPR006458 | - | |
Vifa5g01291 | 354 | MobiDBLite | consensus disorder prediction | 116 | 134 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g01291 | Vifa-Chr5 | 375332457 | 375333521 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Vifa5g01291 | Ovate | 5.7e-25 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g01291 | - | - | aprc:113863721 | 380.563 |