Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g01290 | ATGGCAGAAGAATCACAAAACGGCGTCGTTCTGTTTGAGAAATACGAAATTGGTAAATTGCTCGGAGTTGGCGCGTCGGCGAAGGTGTATCACGCGACAAATATCAAAACCGGGAAGCGCGTGGCAGTGAAAGTTATGAACAAGAGAAAACTCATCAATGGAGGCTTCTCAGCAAACATTGAGCGTGAGATCTCAATTCTCAGTAGTTTGCATCACCCTAACATCATCAACCTCTTTGAAGTACTCGCGTCGAAGACCAAAATCTACTTCATCGTTGAATTGGCCTCCGCCGGTGAGCTCTTCGAAGAGGTAGCAAAGCAAGACAAACTCACCGAAGAACATGCTAGAAAATACTTCCGGCAGCTTATCTCTGCCGTGAAACACTGTAACCGATTTCGGTTTAAGCGCCGTGAAAAACCAGATCCGGCCTGA | 432 | 0.4653 | MAEESQNGVVLFEKYEIGKLLGVGASAKVYHATNIKTGKRVAVKVMNKRKLINGGFSANIEREISILSSLHHPNIINLFEVLASKTKIYFIVELASAGELFEEVAKQDKLTEEHARKYFRQLISAVKHCNRFRFKRREKPDPA | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g01290 | 143 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 5 | 131 | - | - | |
Vifa5g01290 | 143 | SUPERFAMILY | Protein kinase-like (PK-like) | 11 | 132 | IPR011009 | - | |
Vifa5g01290 | 143 | Gene3D | Transferase(Phosphotransferase) domain 1 | 6 | 134 | - | - | |
Vifa5g01290 | 143 | ProSitePatterns | Protein kinases ATP-binding region signature. | 21 | 44 | IPR017441 | GO:0005524 | |
Vifa5g01290 | 143 | ProSiteProfiles | Protein kinase domain profile. | 15 | 143 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g01290 | 143 | FunFam | Aurora kinase A | 8 | 98 | - | - | |
Vifa5g01290 | 143 | SMART | serkin_6 | 15 | 143 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g01290 | 143 | Pfam | Protein kinase domain | 15 | 130 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g01290 | Vifa-Chr5 | 373861584 | 373862089 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g01290 | 2 | 141 | CBL-interacting serine-threonine protein kinases | AT2G30360 | 50.704 | 2.82e-42 | 143 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMKL-CHK1 | Vifa5g01290 | Pkinase | 3.4e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g01290 | - | K12761 | gmx:100788245 | 175.637 |