Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01277 ATGCTTTTTCAATTGAAAAATATTTCAGGATCACACTCAATTGGTCAAGGTAGCTGCAGATTTTTCAGAAACAGAATTTACAACGACAACAACATAGATCCCACCTTTGCAAAATCATTGCAAGCAAATTGTCCTACCAGTGGTGGTGATGCAAATTTGTCCCCACTAGATACCACCACACCAAACACATTTGACAATGCTTATTACAGGAACTTGCAAAACAAAAAGGGTCTCTTTCACTCTGATCAAGTGCTTTTCAATGGTGGTTCCACAGATTCTCAAGTTAATTCTTATGTTAACAACCCTGCAAGTTTTGGAGCTGATTTTGCTAATGCAATGATAAAAATGGGAAACCTTAGTCCACTTACTGGGTCTAGTGGTCAGATAAGGAAGAATTGTAGAAATATCAACTAA 414 0.372 MLFQLKNISGSHSIGQGSCRFFRNRIYNDNNIDPTFAKSLQANCPTSGGDANLSPLDTTTPNTFDNAYYRNLQNKKGLFHSDQVLFNGGSTDSQVNSYVNNPASFGADFANAMIKMGNLSPLTGSSGQIRKNCRNIN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01277 137 Gene3D Peroxidase, domain 2 7 116 - -
Vifa5g01277 137 FunFam Peroxidase 3 116 - -
Vifa5g01277 137 Pfam Peroxidase 8 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g01277 137 PRINTS Plant peroxidase signature 71 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g01277 137 PRINTS Plant peroxidase signature 55 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g01277 137 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g01277 137 PRINTS Plant peroxidase signature 3 15 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g01277 137 SUPERFAMILY Heme-dependent peroxidases 8 137 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa5g01277 137 PRINTS Haem peroxidase superfamily signature 4 19 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g01277 137 PRINTS Haem peroxidase superfamily signature 57 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g01277 137 Gene3D - 117 134 - -
Vifa5g01277 137 ProSiteProfiles Plant heme peroxidase family profile. 1 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g01277 137 PANTHER PEROXIDASE 72-RELATED 7 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01277 Vifa-Chr5 370781127 370781540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01277 8 137 Peroxidase AT5G05340 59.848 7.53e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01277 K00430 - gmx:100815142 219.55