Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01265 ATGGCAGAAGGAAAAGGAAGAGTTTGTGTAACAGGAGGTACAGGTTTTCTTGGTTCATGGATCATCAAGAGTCTCCTTGAAAATGGTTACACTGTTAATACCACTGTTAGAGCTGATCCAGAGAAAAAGAGAGATCTTAGCTTTCTCACAAATCTTCCAGGAGCATCTGAAAAACTAAAATTTTTCATTGCTGATCTTGCCGAACCAGAAAGTTTCAACGCAGCAATTGAAGGGTGCGTTGGAATATTCCACACCGCCGCTTCGGTTGATTTTGAAGAGAAAGAACCAGAAGAAATAGTGACAAAAAGAAGCATTGATGGAGCATTAGGAATTCTTAAAGCCTGCAAAAACTCTAAGACTGTGAAGAGAGTGATTTACACTTCAAGTGCTTCTGCTGTTTATTGTCAAGACATAGAAAAAGCAAAGGATGTAATGGACGAAAGTTATTGGAGCGATATAGACATTCTTAGAAATCATAAACCATTTGGTTGGGCTTATTCAATTTCTAAGACACAAGCGGAGAAAGCTGTTCTCGAGTACGGACAACAAAATGGGTTGGATATTGTGACTATTATACCAACTATTATTGTTGGAGCCTTCATTTGCCCTAAGCTTCCTACCTCTGTTTATGGTGTACTACCTTATTTATTTGGTAATACTGACCACAGTCCAATATCTCGTTTCCATATGGTGCATGTTGACGATGTTGCGCGAGCACATATATTCTTACTTGAACATCCTAATCCAAAAGGGAGATACAATTGTTCACCATTCGTTGCAACTGTTGAGGAAGTAGTTGACATTGTTTCTTCAAAGCATCCTGAATTTCAAATTCCAAAGTCCAAATTGCTTGGCGGGCCTAAAGGTCTAGAGCTTCCACATTTAACATCAAAGAAACTCACTGATGCTGGATTTGAGTTCAAACATAGTATTGAGGAAATGTTTGAGGATGCCATTCAAAGTTGCAAGGAAAAGGGTTTATTTTGA 987 0.386 MAEGKGRVCVTGGTGFLGSWIIKSLLENGYTVNTTVRADPEKKRDLSFLTNLPGASEKLKFFIADLAEPESFNAAIEGCVGIFHTAASVDFEEKEPEEIVTKRSIDGALGILKACKNSKTVKRVIYTSSASAVYCQDIEKAKDVMDESYWSDIDILRNHKPFGWAYSISKTQAEKAVLEYGQQNGLDIVTIIPTIIVGAFICPKLPTSVYGVLPYLFGNTDHSPISRFHMVHVDDVARAHIFLLEHPNPKGRYNCSPFVATVEEVVDIVSSKHPEFQIPKSKLLGGPKGLELPHLTSKKLTDAGFEFKHSIEEMFEDAIQSCKEKGLF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01265 328 CDD FR_SDR_e 8 305 - -
Vifa5g01265 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 319 - -
Vifa5g01265 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 323 IPR036291 -
Vifa5g01265 328 Gene3D - 5 328 - -
Vifa5g01265 328 Pfam NAD dependent epimerase/dehydratase family 8 254 IPR001509 -
Vifa5g01265 328 FunFam Dihydroflavonol reductase 5 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01265 Vifa-Chr5 365127835 365128971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01265 4 328 Monolignol Biosynthesis Gene Families AT2G02400 35.583 2.36e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01265 - K13265 gmx:102659875 478.018