Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01264 ATGCCAAATCATAAGCCTTCCCCTAATCCTAGACGAATCATCAGTAGAGAAAACCATCTAAAAAAGGGTCAAAGAATCCCTAGAGCTGATCCAGAGAAAAAGAGAGATCTTAGCTTTCTCACAAATCTTCCAGGAGCATCTGAAAAACTAAAATTTTTCATTGCTGATCTTGCCGAACCAGAAAGTTTCAACGCAGCAATTGAAGGGTGCGTTGGAATATTCCACACCGCAGCTTCGGTTGATTTTGAAGAGAAAGAACCAGAAGAAATAGTGACAAAAAGAAGCATTGATGGAGCATTAGGAATTCTTAAAGCCTGCAAAAACTCTAAGACTGTGAAGAGAGTGATTTACACTTCAAGTGCTTCTGCTGTTTATTGTCAAGACATAGAAAAAGCAAAGGATGTAATGGACGAAAGTTATTGGAGCGATATAGACATTCTTAGAAATCATAAACCATTTGGTTGGGCTTATTCAATTTCTAAGACACAAGCGGAGAAAGCTGTTCTCGAGTACGGACAACAAAATGGGTTGGATATTGTGACTATTATACCAACTATTATTGTTGGAGCCTTCATTTGCCCTAAGCTTCCTACCTCTGTTTATGGTGTACTACCTTATTTATTTGGTAATACTGACCACAGTCCAATATCTCGTTTCCATATGGTGCATGTTGACGATGTTGCGCGAGCACATATATTCTTACTTGAACATCCTAATCCAAAAGGGAGATACAATTGTTCACCATTCGTTGCAACTGTTGAGGAAGTAGTTGACATTGTTTCTTCAAAGCATCCTGAATTTCAAATTCCAAAGTCCAAATTGCTTGGGGGGCCTAAAGGTCTAGAGCTTCCACATTTAACATCAAAGAAACTCACTGATGCTGGATTTGAGTTCAAACATAGTATTGAGGAAATGTTTGAGGATGCCATTCAAAGTTGCAAGGAAAAGGGTTTATTTTGA 960 0.3844 MPNHKPSPNPRRIISRENHLKKGQRIPRADPEKKRDLSFLTNLPGASEKLKFFIADLAEPESFNAAIEGCVGIFHTAASVDFEEKEPEEIVTKRSIDGALGILKACKNSKTVKRVIYTSSASAVYCQDIEKAKDVMDESYWSDIDILRNHKPFGWAYSISKTQAEKAVLEYGQQNGLDIVTIIPTIIVGAFICPKLPTSVYGVLPYLFGNTDHSPISRFHMVHVDDVARAHIFLLEHPNPKGRYNCSPFVATVEEVVDIVSSKHPEFQIPKSKLLGGPKGLELPHLTSKKLTDAGFEFKHSIEEMFEDAIQSCKEKGLF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01264 319 Gene3D - 18 319 - -
Vifa5g01264 319 FunFam Dihydroflavonol reductase 20 319 - -
Vifa5g01264 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 314 IPR036291 -
Vifa5g01264 319 MobiDBLite consensus disorder prediction 1 33 - -
Vifa5g01264 319 MobiDBLite consensus disorder prediction 10 33 - -
Vifa5g01264 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 40 310 - -
Vifa5g01264 319 CDD FR_SDR_e 30 296 - -
Vifa5g01264 319 Pfam NAD dependent epimerase/dehydratase family 33 245 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01264 Vifa-Chr5 365002679 365004365 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01264 36 319 Monolignol Biosynthesis Gene Families AT2G02400 34.035 9.06e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01264 - K13265 gmx:102659875 415.231