Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g01240 | ATGACTATAGATGATCAGCATCATCATCATCATAATCATCATAACTGGGAAGTTTCTGAACTCAATGATGTTCCTAAATTCAAATCTGTTCAACCACCTTCTCTCCCTCTTTCACAATCACCAGTTTCATCTTCTTTTCATTTACCATTTTCATCTACTTTTAGCCCAACTGATTTCTTAATCTCACCTTTCTTTCTTTCTTCACCAAATGTTTTTGCTTCTCCAACTACTGAGGCTTTTGCTAACCAAAGCTTCAACTGGAATAAGGAACAAGACCAACAAAGTGACAAGAAGGATGAGAAAAACTTCTCTGATTTCTCTTTTCCAACTCAAACAAAACATGAACCTGTCTTTCAATCTTCCTCAAACATGTTTCAACCGGAACCAGTTAAGAAACAAGATATATGGAAGTTCAATGAGCCGGCAAAGATAAGCGATTTTTCGTCCGAAAGGACGGCGTCAAAATCTGATTTCGCTTCAACTCAGAGCTTTTCGACTGATATAGTACTAAGTAAACCAGAAACACATGGTAACTCAGTTACTGGATCTGGCTATGTTAACTATAATGTATCTCAATCTGTTAGAGAGCAAAAGAGATCAGAAGATGGATTCAATTGGCGAAAATATGGACAGAAACAAGTGAAAGGAAGCGAAAATCCGCGAAGTTATTATAAGTGTACGCATCTGAGTTGCTCGATGAAGAAGAAAGTTGAGAGGGATTTGGATGGACAGATTACTGAAATTGTGTATAAGGGAACTCATAACCACCCTAAGCCTCAGTCTAACAGAAGAGCAAACTCTCAGCCTTCTTCGTCGTGCACCAACTCGGGTATCTCTGATCAATCTGTGATGGATCGGGTTTCTATACAAGAAGATTCTTCGGCGTCTGTGGGAGAGGAAGAGTTTGAGCAAACATCACAGACTAGTTATTCTGGTGGAAATGACGATGCCCTTGGACTAGATGCCAAAAGATGGAAGGGTGATGTTGAAAATGATGGCTATTCGGCTGCTGGTAGTAGAACTGTTAAAGAACCTAGAGTTGTAGTTCAAACTACAAGTGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTTGTTAAAGGAAATCCTAACGCAAGGAGCTATTACAAATGCACTGCCTCTGGTTGTTCAGTGAGAAAACACGTTGAGCGAGCTGCACATGATATCAAAGCCGTGATCACAACTTACGAAGGGAAACACAACCATGACGTACCAGCTGCACGCGGTTCTGCAGGTTACAACATGAACAGAAGTTCCATGAACAACAGCATTATACCAGCACCTATTAGGCCCTCAGTGGTGAACTGTTATTCAAACGCATCAAGTTTCACAAATTCACTTTATAATAAAACTGGTCTTCCTACTAATGGAAACCACGAGTCGTTTCAACCAGACATGTTGCAGGGTCATGGAAGGCTTGGATATTCATCTCTCGGAAGATCAATGGATTCATCTGCCAACCATTCACAATACTCAGACGCGGCGTACTTAAAGGCTAAGGATGAGAGGAAAGACGACTCATTCCTTCAATCACTTTTGTCGAAAGACTATTAA | 1593 | 0.4036 | MTIDDQHHHHHNHHNWEVSELNDVPKFKSVQPPSLPLSQSPVSSSFHLPFSSTFSPTDFLISPFFLSSPNVFASPTTEAFANQSFNWNKEQDQQSDKKDEKNFSDFSFPTQTKHEPVFQSSSNMFQPEPVKKQDIWKFNEPAKISDFSSERTASKSDFASTQSFSTDIVLSKPETHGNSVTGSGYVNYNVSQSVREQKRSEDGFNWRKYGQKQVKGSENPRSYYKCTHLSCSMKKKVERDLDGQITEIVYKGTHNHPKPQSNRRANSQPSSSCTNSGISDQSVMDRVSIQEDSSASVGEEEFEQTSQTSYSGGNDDALGLDAKRWKGDVENDGYSAAGSRTVKEPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTASGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSAGYNMNRSSMNNSIIPAPIRPSVVNCYSNASSFTNSLYNKTGLPTNGNHESFQPDMLQGHGRLGYSSLGRSMDSSANHSQYSDAAYLKAKDERKDDSFLQSLLSKDY | 530 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g01240 | 530 | MobiDBLite | consensus disorder prediction | 252 | 316 | - | - | |
Vifa5g01240 | 530 | MobiDBLite | consensus disorder prediction | 255 | 314 | - | - | |
Vifa5g01240 | 530 | ProSiteProfiles | WRKY domain profile. | 195 | 259 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g01240 | 530 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 112 | 436 | IPR044810 | GO:0003700 | |
Vifa5g01240 | 530 | SUPERFAMILY | WRKY DNA-binding domain | 196 | 259 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g01240 | 530 | FunFam | WRKY transcription factor 33 | 345 | 411 | - | - | |
Vifa5g01240 | 530 | Gene3D | WRKY domain | 345 | 411 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g01240 | 530 | MobiDBLite | consensus disorder prediction | 87 | 106 | - | - | |
Vifa5g01240 | 530 | Gene3D | WRKY domain | 185 | 260 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g01240 | 530 | ProSiteProfiles | WRKY domain profile. | 353 | 418 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g01240 | 530 | SUPERFAMILY | WRKY DNA-binding domain | 350 | 418 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g01240 | 530 | FunFam | WRKY transcription factor | 189 | 260 | - | - | |
Vifa5g01240 | 530 | Pfam | WRKY DNA -binding domain | 359 | 415 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g01240 | 530 | Pfam | WRKY DNA -binding domain | 201 | 257 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g01240 | 530 | SMART | WRKY_cls | 358 | 417 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa5g01240 | 530 | SMART | WRKY_cls | 200 | 258 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g01240 | Vifa-Chr5 | 358371106 | 358373125 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g01240 | 187 | 469 | WRKY Transcription Factor Family | AT2G38470 | 57.329 | 1.06e-103 | 319 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vifa5g01240 | WRKY | 1.1e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g01240 | K13424 | - | gmx:100792833 | 734.561 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa5g01240 | 5 | 358371106 | 358373125 | Vifa5g01240 | 5 | 358371106 | 358373125 | ECH |