Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01226 ATGGATTCAGATGAAGAAGATTCTGTTTTCTTCAGAACAACAATAGAGCGCGAGGAAGATTCAATCAACCACAAGAAAAAAGTTGTTGCTGAATCCTTTGGTAAGGTTCATGGATCTTTGGATCGTGCCAAAAAAGTGAGAAGGAAAACTCTTAAGGTTGTGAAGCAAGACAAGAAGAAGAAGTCACACCGTCATGCTTACAAGCATATGCAATACAATCGTCGATTCCTTATGTCTTCATATCTTTATGCATCACAATACAACAACGAAAATGTTGAAGATGAAGCCTCAGTTGCATCTGAAGATGTTGTTTCTCTACCTTCCCTAAGTGAAAATTCCATGGAATCACAATTCCTGGTAAACCTACTGGAAGATTCTCTGATGGTCGCGTTGACACTGGTTAAATTGTTAACACTCTTCTCTCTTTCTTTGTGA 435 0.3839 MDSDEEDSVFFRTTIEREEDSINHKKKVVAESFGKVHGSLDRAKKVRRKTLKVVKQDKKKKSHRHAYKHMQYNRRFLMSSYLYASQYNNENVEDEASVASEDVVSLPSLSENSMESQFLVNLLEDSLMVALTLVKLLTLFSLSL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01226 144 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 12 79 - -
Vifa5g01226 144 Pfam Ribosomal protein S30 35 79 IPR006846 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01226 Vifa-Chr5 355364275 355365589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01226 34 93 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 50.000 6.93e-06 40.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01226 K02983 - twl:119990545 56.9954