Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01204 ATGGCACCTACAGCTACAAAAACTGCAAATGGATCAAACCACCCAAATGAAACGAAAGGAAAAATCATTACTTGCAAAGCTGCTGTGGCATATGGTCCAGGAGAACCCTTAGTAGTAGAAGAAATTATTGTGCATCCTCCTCGAAAAATGGAGGTTCGAATCAAAATCCTGTATACTTCCATTTGTCACACCGATCTCAGCGGTTGGCAAGGCGAGTCCGAACCTCAACGTGCTTTCCCTCGAATTTTCGGGCATGAAGCCTCCGGGATTGTGGAGAGTGTAGGGGAAGGAGTGAGTGACATGAAAGAAAGGGACTATGTGGTGGTAATATTCAACGGAGAATGTGGTGAGTGTGTGTACTGCACGTGTGAGAAAACCAACATGTGTGAGAAATTTGGGGTGAATCCAATGAAGAAGGAAATGTGTGATGGAACAAGTAGGTTTAGTACAAAAGATGGTAAAGCTATTTTCCACTTTATGAACACTTCAACTTTCACGGAGTATACTGTCGTCGATTCAGCTTGTGTTGTTAAGATCAATCCTCAGTATACATCAAGTCTCAAGAATCTCACCTTGCTTAGTTGTGGAGTTTCAACAGTCATGTGTATTAGCAACAAGTCAGATTCTGAAAATTTGGTGGAGCAGGATCTTTGGTCTTTACGAAAGAAAATTATAGCATCTAGAATGTCCAGAAAACAGGAGAAATAA 708 0.4153 MAPTATKTANGSNHPNETKGKIITCKAAVAYGPGEPLVVEEIIVHPPRKMEVRIKILYTSICHTDLSGWQGESEPQRAFPRIFGHEASGIVESVGEGVSDMKERDYVVVIFNGECGECVYCTCEKTNMCEKFGVNPMKKEMCDGTSRFSTKDGKAIFHFMNTSTFTEYTVVDSACVVKINPQYTSSLKNLTLLSCGVSTVMCISNKSDSENLVEQDLWSLRKKIIASRMSRKQEK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01204 235 Gene3D - 17 233 - -
Vifa5g01204 235 Pfam Alcohol dehydrogenase GroES-like domain 51 178 IPR013154 -
Vifa5g01204 235 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 84 98 IPR002328 GO:0008270|GO:0016491
Vifa5g01204 235 PANTHER ALCOHOL DEHYDROGENASE 20 201 - -
Vifa5g01204 235 FunFam alcohol dehydrogenase 1-like isoform X1 33 199 - -
Vifa5g01204 235 SUPERFAMILY GroES-like 18 197 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01204 Vifa-Chr5 348782773 348786116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01204 51 199 Monolignol Biosynthesis Gene Families AT2G21730 32.000 1.73e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01204 K00001 - gmx:100787307 307.375