Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01106 ATGGTAGCAAAAGATAGGGTAAGGCTATTGCATTATCCATGCTTAAGGTCAATAGGCTCTTTCGTGATAGAGTGTGATGAACGAATCCAGAAGATTCAGACAGTCAAAGTGATGGAAGGAATCCTAATATGCGCCGCACCTCATTGTCTCAAGTCATTCTTTAAGAAAGCTGAGTTTGAATCTCATATCCACGAGAACCACGCCAATCTTGTTCGTTCCAATGCAGATAAAGAAGATGGAAATGAGTCAGAGGCACAAAGTGTCAGGCAACCTGCGGCCTCAGATTCCACAGCTCGAGGCCCCCAAAGGCAAGTCTTTTCTCCGGGTTCAAATTCTCAACCACACGATCTGGAAGATAGAACTCGTCGGCAGCCAGCAAGAGATCAAGCTCCTTCAAGACCAACAATGCAGCAAAAGCCACCATTTTTTGGCCAACAACAACACCCTTCAGATACAATGTCTGGTTCTATTGGAGGTATGCAACAGGGCTTTCATCAACAAAGTTTTGACATGCAGCAACAGCATCCCCCACAAGAACCTTCTCAGTTTACCGACATACCACAATCAGTTGGTCCAGATAACTCATTTCCCGAGTATCCAACAATGCACCCTGGACAATCCGCTAATATCCCCTCACACTCAAACCCAATGCTGAACCCTCCTTTGCCATTTTATCCCTCTTACCCTCCTCAAGACCGAGCTCAACCATTTTATGCTGCTCCCTATGATATGCCTAGGCAGGACTCAGCTTCTGATATGGGTGGAGACCCAAATTCATTAATGGGTTTCTCACAAGGTGGCCCAAATTTTCAAGGAAATTATTCCCAGCAATGGAATGCAGCAGGTGTTCCATTTGAACAAGCACAGGGTGGTGGTGTGGTTGTGGATCCAAGGGATACCAAAGGAATATTGGCACCACCACAGCCCATGCACCTCCCACCACCACCGCCGCCGCCAGCCCACATGTTGAAACATAATAACTATGCTGTTGAGCACGGACAAGATGGTCAGGGTTATGGTTGGCAGCATGATAGTCGTGACAGCTTTAGCGGTCAAGGCTAA 1062 0.4699 MVAKDRVRLLHYPCLRSIGSFVIECDERIQKIQTVKVMEGILICAAPHCLKSFFKKAEFESHIHENHANLVRSNADKEDGNESEAQSVRQPAASDSTARGPQRQVFSPGSNSQPHDLEDRTRRQPARDQAPSRPTMQQKPPFFGQQQHPSDTMSGSIGGMQQGFHQQSFDMQQQHPPQEPSQFTDIPQSVGPDNSFPEYPTMHPGQSANIPSHSNPMLNPPLPFYPSYPPQDRAQPFYAAPYDMPRQDSASDMGGDPNSLMGFSQGGPNFQGNYSQQWNAAGVPFEQAQGGGVVVDPRDTKGILAPPQPMHLPPPPPPPAHMLKHNNYAVEHGQDGQGYGWQHDSRDSFSGQG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01106 353 MobiDBLite consensus disorder prediction 307 322 - -
Vifa5g01106 353 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 22 343 IPR040383 GO:0016567|GO:0061630
Vifa5g01106 353 MobiDBLite consensus disorder prediction 85 114 - -
Vifa5g01106 353 MobiDBLite consensus disorder prediction 128 215 - -
Vifa5g01106 353 MobiDBLite consensus disorder prediction 303 353 - -
Vifa5g01106 353 MobiDBLite consensus disorder prediction 70 218 - -
Vifa5g01106 353 ProSitePatterns Zinc finger C2H2 type domain signature. 44 67 IPR013087 -
Vifa5g01106 353 MobiDBLite consensus disorder prediction 70 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01106 14 349 C2H2 Transcription Factor Family AT5G01160 33.523 5.37e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01106 K15685 - gmx:100817582 470.7