Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01084 ATGTCGTGTACCGCTCCCGGAAACGGTTTTCAGTCCAACTCTACGGTGGCGACGATGTTAGGACGGAGGAGAATTCCGATACACACATCCTTCTATTGGGGACACAGAGCGGTTATATTATTCAAGTGCTGGCCCGGCGACAGCGCCGGCATGTACGCGTTGGCGTTGATTCTCGTTTTCGTCATGGCGGTTTTGGTGGAGTGGCTTTCGTTTACTAACATTGTGAAACTCAAACCTGGGGCATCAAACGACGTTGTTGGGTCGCTTCTTAGGACGGGACTGTACGGTGTTCGTACTGCTTTTTCGTACTTGGTTATGTTGGCAGTTATGTCGTTTAATGGTGGCGTGTTTCTCGCCGCAATTTTCGGACATGTTATTGGGTTTATGGTTTTTGGAACTATGGCTATTCTGAAGAAATCGGGTGGGTTGGATTCTGCCAAATCGTAG 447 0.4877 MSCTAPGNGFQSNSTVATMLGRRRIPIHTSFYWGHRAVILFKCWPGDSAGMYALALILVFVMAVLVEWLSFTNIVKLKPGASNDVVGSLLRTGLYGVRTAFSYLVMLAVMSFNGGVFLAAIFGHVIGFMVFGTMAILKKSGGLDSAKS 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01084 148 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 27 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa5g01084 148 Pfam Ctr copper transporter family 86 131 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa5g01084 148 Pfam Ctr copper transporter family 30 72 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01084 Vifa-Chr5 321430112 321430558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01084 30 140 Inorganic Solute Cotransporters AT5G59030 48.649 9.28e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01084 K14686 - gmx:100803410 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01084 5 321430112 321430558 Vifa5g01084 5 321430112 321430558 ECH