Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01083 ATGGACATGCCTATGCCTCCAGGTCAAAACATGCCTCCCTCAAATGGCACAACCAACATGATGATGATGAACATGCAAATGAGTTTCTACTGGGGCAGAAAAGCCACGGTGCTTTTCTCTGGATGGCCTAATAACAACCTTGGAATGTACATCTTAGCTCTTTTGTTTGTGTTTTTCCTAGCTATGGCTGCTGAGGTTTTGTCCAACCAACCTCCCATCAAACGTGGGACTAATCCTCTCATGGGAGGGTTGATTCAGTCTTGTGTTCATTTCTTTCGAATCGTTTTCATTTACTTGCTCATGCTTGCTGTCATGTCCTTCAACGTTGGAATCTTCATTGCTGCTGTTGTTGGTCATACGTTGGGATTCTTCATCGCGCGGTCGCGTGCTATTGCTGTTGCTAATGGAGAAGATCAACGTTCGTCATCTGTTACACTTAAAATTTGA 447 0.4407 MDMPMPPGQNMPPSNGTTNMMMMNMQMSFYWGRKATVLFSGWPNNNLGMYILALLFVFFLAMAAEVLSNQPPIKRGTNPLMGGLIQSCVHFFRIVFIYLLMLAVMSFNVGIFIAAVVGHTLGFFIARSRAIAVANGEDQRSSSVTLKI 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01083 148 Pfam Ctr copper transporter family 27 68 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa5g01083 148 Pfam Ctr copper transporter family 78 125 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vifa5g01083 148 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 17 138 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01083 Vifa-Chr5 321178911 321179357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01083 28 143 Inorganic Solute Cotransporters AT5G59030 43.697 4.74e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01083 K14686 - gmx:100527849 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01083 5 321178911 321179357 Vifa5g01083 5 321178911 321179357 ECH