Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01077 ATGGCTACAAACCAGGAAGAAGTGAAACTTTTAGGGCCTCTTGGAAGCCCATTTGTGTGCAGAGTAAATATTGCTCTAAAACTAAAGGGAATTGAATGTGAATTTGTTGAAGAAGACTTGCGCAACAAGAGTGAGCTTCTTCTCAAGTATAATCCAGTTTATAAAAAGGTTCCAGTTTTTGTTCATAATGAAAAGCCCATATCAGAATCCCTTGTTATTCTTGAATACATTGATGAGACTTGGAAACAAAATCCCATTTTATCTTCAGATCCTTACCAAAGATCCTTGGCTCGTTTCTGGTCAAAGTTCATAGATGACAAAATTGTGGCTGCTTCATTCAAATCTGCTTTTACAATTGATGAGAAAGAGCGTGAGAAGAATATTGCAGAATCATCTGAGGGACTTCAGGTTCTTGAGAATGAGTTGAGGGACAAGTTCTTTGGAGGAGAAGAGATTGGTTTTGTGGACATTGCTGCTGTGTTCATAGCTTTTTGGATCCCTTTGGTTCAAGATGTATCAGGGTTGCAATTGTTTACGGCTGAAAAGTTTCCAAAACTTTATAAATGGAGCAAAGAATTTGTCAACCATCCTGTGGTGAAGAAAAGTCTGCCTCCTAGAGAACCTCTTTTTGCCTTGCACAAAGGTCGCTATGAGAGCCTTTTTAATGCTTCAAAATAG 678 0.3835 MATNQEEVKLLGPLGSPFVCRVNIALKLKGIECEFVEEDLRNKSELLLKYNPVYKKVPVFVHNEKPISESLVILEYIDETWKQNPILSSDPYQRSLARFWSKFIDDKIVAASFKSAFTIDEKEREKNIAESSEGLQVLENELRDKFFGGEEIGFVDIAAVFIAFWIPLVQDVSGLQLFTAEKFPKLYKWSKEFVNHPVVKKSLPPREPLFALHKGRYESLFNASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01077 225 FunFam Tau class glutathione S-transferase 1 89 - -
Vifa5g01077 225 CDD GST_N_Tau 8 81 - -
Vifa5g01077 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 14 207 IPR045073 -
Vifa5g01077 225 Gene3D Glutaredoxin 1 89 - -
Vifa5g01077 225 SFLD Main.3: Omega- and Tau-like 4 220 IPR045073 -
Vifa5g01077 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vifa5g01077 225 SFLD Main (cytGST) 4 220 - -
Vifa5g01077 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Vifa5g01077 225 FunFam Tau class glutathione S-transferase 87 223 - -
Vifa5g01077 225 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Vifa5g01077 225 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Vifa5g01077 225 Pfam Glutathione S-transferase, C-terminal domain 110 197 IPR004046 -
Vifa5g01077 225 Gene3D - 90 224 - -
Vifa5g01077 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vifa5g01077 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01077 Vifa-Chr5 317281083 317281871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01077 4 220 Glutathione S-transferase Gene Family AT3G09270 54.751 5.47e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01077 K00799 - gmx:547577 354.755