Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01075 ATGATTAATTCAGTAATTGCCAAAGTCAAGAGAGTTCTTCAAGGATGTGGTGCAATCGCTGCATCTGAAGAAGATGCGAAGCTTCTGGGTGTTGTGGGAAGTCCATTTGTGATCAGAGTTCAAATTGCTTTGGCATTGAAGGGAATTGAATACAAATTTGTTCCAGAAAACATAGCCAACAAAAGTGAACTTCTCCTCAAATACAACCCAGTTTATAAAAAGATTCCTGTTTTTGTTCACAAAGAGAAACCCGTGTCAGAATCACTTGTGATTCTTGAGTACATCGATGAGACATGGAAACAAAATCCAATCATTCCTTCTGATCCTTACCATAGAGCCATGGCTCGATTTTGGTCCAAGTTCATTGATGATAAGTGTGTGGCTGCTGCATTGCAATCTGTTTTTTTGGTTGATGAGAAAGAACGCAAGATGGCTAGTGAAGAATTGTTTAATGCTTTACAGTTTCTTGAGAATGAGTTGAAGGACAAGTTCTTTGGAGGAGAAGAGATTGGCATTGTGGATATTGCTGCTCTCTTCATTCCTTTAACGCAAGAAATAGCAGAGTTTCAGTTATTCACCCGTGAGAAATTACCAAAGCTACACAAATGGAGTAGAGATTTTTACAACCATCCAGCAGTTAGAGAAACTATGCCTTCAAAAGAACAACAACTTGCGTATTACAAAGTTGTCGCTGGAATAATAAATAAGTAG 711 0.3826 MINSVIAKVKRVLQGCGAIAASEEDAKLLGVVGSPFVIRVQIALALKGIEYKFVPENIANKSELLLKYNPVYKKIPVFVHKEKPVSESLVILEYIDETWKQNPIIPSDPYHRAMARFWSKFIDDKCVAAALQSVFLVDEKERKMASEELFNALQFLENELKDKFFGGEEIGIVDIAALFIPLTQEIAEFQLFTREKLPKLHKWSRDFYNHPAVRETMPSKEQQLAYYKVVAGIINK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01075 236 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 108 226 IPR010987 -
Vifa5g01075 236 Pfam Glutathione S-transferase, C-terminal domain 138 211 IPR004046 -
Vifa5g01075 236 CDD GST_N_Tau 27 99 - -
Vifa5g01075 236 SUPERFAMILY Thioredoxin-like 27 126 IPR036249 -
Vifa5g01075 236 SFLD Main.3: Omega- and Tau-like 23 230 IPR045073 -
Vifa5g01075 236 CDD GST_C_Tau 109 229 IPR045074 GO:0004364|GO:0006749
Vifa5g01075 236 Gene3D Glutaredoxin 19 107 - -
Vifa5g01075 236 Pfam Glutathione S-transferase, N-terminal domain 27 97 IPR004045 -
Vifa5g01075 236 Gene3D - 108 234 - -
Vifa5g01075 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 24 103 IPR004045 -
Vifa5g01075 236 FunFam Tau class glutathione S-transferase 105 236 - -
Vifa5g01075 236 FunFam Glutathione S-transferase GSTU6 21 105 - -
Vifa5g01075 236 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 28 222 IPR045073 -
Vifa5g01075 236 SFLD Main (cytGST) 23 230 - -
Vifa5g01075 236 SUPERFAMILY GST C-terminal domain-like 97 232 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01075 Vifa-Chr5 316938348 316939142 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01075 21 228 Glutathione S-transferase Gene Family AT2G29420 46.009 3.03e-65 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01075 K00799 - gmx:548029 311.227