Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01072 ATGGCATCAAATAACGAAGAAGTGAAACTTTTTGGATTGAGAGGAAGTCCATTTGTAGCTAGGGTAGATATAGCTCTAAAACTGAAGGGAATTGAATACGAATATGTGCTTGAAAAATTGGGAAACTTTAGTGATGCACTCATCAAATATAATCCAGTTTATAAGAAAGTTCCTGTATTGGTTCATAATGAAAAGCCTATTTCAGAATCAATTTTGATTCTTGAATACATCGATGAAACTTGGAAGCAAAATCCAATCTTACCTTCAGATCCTTACAAAAGAGCCTTGGCTCGTTTCTGGTCAAATTTCATAGATGATAAGTTTTTGGGTGCGGTAAGGAAAGCTACTTCTTCTCATGATGAAAAGGAACGTGAAGAGAGTTTCAAGGAAGTAGAAGTGGCTCTTCAATTTCTTGAGGATGAACTCAAGGGGAAATTTTTTGGTGGAGAAGAGATTGGGATTGTTGATATTACTGCTGTTTTTATAGCTTTTTGGTTCCCTGTTATACAAGAAGCTGCAGGATTGAAGTTGTTTACTAGTGAGAAATATCCTAAGCTTTACAAATGGAGTGAAGATTTCAACAATCACCCAGTTGTTAAGGAACAATTGCCTCCAAGAGAAACACTTTTATCTTTTTTTAAAGCTCGTTTTGAAAGTTTGGCTGCTTCAAAATAA 675 0.3526 MASNNEEVKLFGLRGSPFVARVDIALKLKGIEYEYVLEKLGNFSDALIKYNPVYKKVPVLVHNEKPISESILILEYIDETWKQNPILPSDPYKRALARFWSNFIDDKFLGAVRKATSSHDEKEREESFKEVEVALQFLEDELKGKFFGGEEIGIVDITAVFIAFWFPVIQEAAGLKLFTSEKYPKLYKWSEDFNNHPVVKEQLPPRETLLSFFKARFESLAASK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01072 224 Gene3D - 90 224 - -
Vifa5g01072 224 CDD GST_N_Tau 8 81 - -
Vifa5g01072 224 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vifa5g01072 224 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Vifa5g01072 224 FunFam Tau class glutathione S-transferase 87 223 - -
Vifa5g01072 224 SFLD Glutathione Transferase (cytosolic) 4 223 IPR040079 -
Vifa5g01072 224 Gene3D Glutaredoxin 1 89 - -
Vifa5g01072 224 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Vifa5g01072 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Vifa5g01072 224 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Vifa5g01072 224 Pfam Glutathione S-transferase, C-terminal domain 100 197 IPR004046 -
Vifa5g01072 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Vifa5g01072 224 FunFam Glutathione S-transferase GSTU6 3 87 - -
Vifa5g01072 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vifa5g01072 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 209 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01072 Vifa-Chr5 316614674 316615452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01072 3 223 Glutathione S-transferase Gene Family AT3G09270 52.232 5.51e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01072 K00799 - gmx:100527851 317.005