Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01071 ATGGCAGCAAATAAGGAAGATGTGAAGCTTTTGGCAATGGTGGAAAGTCCCTTTGTGGGTAGGGTTGATATTGCTCTAAATTTGAAGGGAATTCAATACAAATATGAGGTAGAAAACTTGAAAAACAAGAGTGAGCTTCTCCTCAAATCTAACCCAGTATATAAGAAAGTTCCAGTATTAGTTCATAATGAGAAATCCATATCAGAATCACTTGTGATTCTTGAGTATATTGATGAAACATGGACGCAAAATCCAATATTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTCTGGTCAAAGTTCATAGATGACAAGGTTATTGATGCTGCAAGGAAAGCTCTATACAGTCATGATGAGAAAGAACGGGAGAAAGGTGCTGAAGAAATAGATGAGGCTCTTCATCTTCTTGAGAATGAGCTGAAGGATAAATTCTTTGGTGGAGAAGAGATTGGAATTGTTGATATTACTGCTGTCATCATAGCTTACTGGCTTCCTATTATACAAGAAGCATTTGGAGAGAAGTTGTTCACTAGTGATAAATTTCCCAAGCTTTACAATTGGAGTCAAGACTTCAACAATCACCCTATTGTTAAGGAACATTTGCCTCCTAGAGAAACCCTTATGATCTATTACAAAGGTCATTATGAAAGGCACATTGCTTCTAAATAG 675 0.3719 MAANKEDVKLLAMVESPFVGRVDIALNLKGIQYKYEVENLKNKSELLLKSNPVYKKVPVLVHNEKSISESLVILEYIDETWTQNPILPSDPYKRALARFWSKFIDDKVIDAARKALYSHDEKEREKGAEEIDEALHLLENELKDKFFGGEEIGIVDITAVIIAYWLPIIQEAFGEKLFTSDKFPKLYNWSQDFNNHPIVKEHLPPRETLMIYYKGHYERHIASK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01071 224 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Vifa5g01071 224 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Vifa5g01071 224 CDD GST_N_Tau 8 81 - -
Vifa5g01071 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Vifa5g01071 224 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Vifa5g01071 224 Gene3D Glutaredoxin 1 89 - -
Vifa5g01071 224 FunFam Tau class glutathione S-transferase 1 89 - -
Vifa5g01071 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Vifa5g01071 224 Pfam Glutathione S-transferase, C-terminal domain 118 197 IPR004046 -
Vifa5g01071 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 208 IPR045073 -
Vifa5g01071 224 FunFam Tau class glutathione S-transferase 87 223 - -
Vifa5g01071 224 SFLD Main.3: Omega- and Tau-like 4 220 IPR045073 -
Vifa5g01071 224 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Vifa5g01071 224 SFLD Main (cytGST) 4 220 - -
Vifa5g01071 224 Gene3D - 90 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01071 Vifa-Chr5 316595366 316596200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01071 4 217 Glutathione S-transferase Gene Family AT3G09270 53.456 4.05e-73 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01071 K00799 - gmx:547578 322.783