Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01036 ATGCAATTGCAAACCCATCTCAAACTCATCCTACCATTTTCATTCTTCCTCTTTCTCCCAATCCTCTCCCAAATTGACCAACTCTTGTATGCAGGATTCAAGAACACTGATCCTAAAAATCTCACCTTGAATGGAATAGCAGAGATTGAAAAAAATGGAATGATAAGATTAACAAATGAAACAAGCAGACTAATGGGTCATGCTTTTTACCCTCTACCTTTCCAACTCAAGAACAAAACAACCGGTAAAGTTTTCTCCTTTTCTTCATCTTTTGCTCTTGCTGTTGTTCCTGAGTATCCTAAACTAGGTGGTCATGGCATGGCTTTCACAATAGCACCTACAAAAGATCTCAAAGCTTTACCTAGTCAGTATCTTGGTCTTCTCAATTCAAGTGATGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTTCAAGATTTTGAGTTTGGTGATATTAATGATAATCATGTTGGTATAAACATCAATAGTATGCAGTCAAATGCTTCTATTAAAGCTGGTTATTACAATGATGACTTGGTTTTTCAAGATCTTAATATTAAAGGTGGAAAAGCTATTCTAGTTTGGGTTGATTATGATTCTTTGATTAATAATGTTAGTGTTACACTTTCTCCAACCTCAAACAAACCTAAAAAACCAACCTTGTCTTTTCATATGGATTTATCATTGATTCTTCATGATACTATGTATGTTGGTTTCTCTGCTTCAACTGGTTTACTTGCTAGCTCTCATTATCTTTTGGGTTGGAGTTTCAAAATCAACGGACCAGCACCATTTCTTGATTTGTCTTCACTACCACATCTTCCAAAACCAAAGAAGAAACACACTTCTTTGATAACCGGTGTTTCGGTCGCGGCTTCTGTTATTTTCTTGTGTTCTATGGTATTTGGTTTTTACCTTTTCAGAAAAATCAAGAATGCTGATGTTATAGAAGCATGGGAGCTTGAAGTTGGGCCTCATAGATACTCTTATCAAGAGCTTAAGAAAGCTACAAAAGGTTTCAAGGAGAAAGGGTTACTTGGGCAGGGTGGTTTTGGAAGAGTTTACAAAGGGACGTTGCCGAAATCAAAGATTCAAGTAGCTGTTAAGAGGGTTTCGCATGAATCGAAACAAGGGTTGAGGGAATTTGTGTCGGAAATTGCAAGTATAGGCCGGCTTCGTCACCGGAATTTGGTTCAGTTACTCGGGTGGTGTCGTCGAAGAGGAGACCTTTTACTTGTGTATGATTTCATGGCGAATGGAAGCTTAGACAAGTACTTGTTTGAAGATTCAGAATTTGTGCTGAGTTGGGAACAAAGGTTTAAGATAATAAAGGGTGTTGCTTCGGGTCTTTTATATCTTCATGAAGGGTATGAGCAAGTGGTAATACATAGAGATGTTAAAGCTAGTAATGTGCTGTTAGATTTTGAACTCAATGGAAGATTAGGTGATTTTGGTTTGGCAAGATTGTATGAACATGGTGCTAATCCAGGTACAACAAGAGTGGTGGGAACATTAGGCTATTTAGCGCCGGAGTTGCCTAGAACGGGAAGAGCAACAACAAGCTCCGATGTTTTTGCATTTGGTGCGCTTTTGCTCGAGGTTGCTTGCGGAAGAAGGCCTATTGAACCAAAGGCAATACAAGAAGAGTTAGTGTTGGTGGATTGGGTGTGGGAAAGGTTCAAAGAAGGAAGAGCAGTTGAAGTAGTGGACCCTAAATTGAATGGTAATTTTGTTGAAAGTGAGGTAATGATGGTGTTGAAATTGGGATTGATATGTTCAAATGATGTTCCTACTATAAGGCCTAACATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTACCAAATGAAATGAGAAAGCCAGGAGGTATTGATTCACAAGAGGGATTTGATGAATTCTTGCATTCTCTTGGAACTACTTCATTTGATAAGACAAATTCAAGCTCCTATGTTGGAAATAGAGACGACATGAATACTAGTTTTATCTCTTTTGGTAATTCACCTTAA 2025 0.3812 MQLQTHLKLILPFSFFLFLPILSQIDQLLYAGFKNTDPKNLTLNGIAEIEKNGMIRLTNETSRLMGHAFYPLPFQLKNKTTGKVFSFSSSFALAVVPEYPKLGGHGMAFTIAPTKDLKALPSQYLGLLNSSDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGININSMQSNASIKAGYYNDDLVFQDLNIKGGKAILVWVDYDSLINNVSVTLSPTSNKPKKPTLSFHMDLSLILHDTMYVGFSASTGLLASSHYLLGWSFKINGPAPFLDLSSLPHLPKPKKKHTSLITGVSVAASVIFLCSMVFGFYLFRKIKNADVIEAWELEVGPHRYSYQELKKATKGFKEKGLLGQGGFGRVYKGTLPKSKIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFEDSEFVLSWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGRATTSSDVFAFGALLLEVACGRRPIEPKAIQEELVLVDWVWERFKEGRAVEVVDPKLNGNFVESEVMMVLKLGLICSNDVPTIRPNMRQVVRILDGEVELPNEMRKPGGIDSQEGFDEFLHSLGTTSFDKTNSSSYVGNRDDMNTSFISFGNSP 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01036 674 Gene3D Transferase(Phosphotransferase) domain 1 421 629 - -
Vifa5g01036 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Vifa5g01036 674 Gene3D - 27 264 - -
Vifa5g01036 674 SUPERFAMILY Protein kinase-like (PK-like) 326 620 IPR011009 -
Vifa5g01036 674 FunFam L-type lectin-domain containing receptor kinase S.4 24 268 - -
Vifa5g01036 674 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa5g01036 674 CDD STKc_IRAK 350 616 - -
Vifa5g01036 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 284 IPR013320 -
Vifa5g01036 674 PANTHER - 44 621 - -
Vifa5g01036 674 Pfam Legume lectin domain 28 274 IPR001220 GO:0030246
Vifa5g01036 674 FunFam Lectin-domain containing receptor kinase A4.3 329 420 - -
Vifa5g01036 674 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Vifa5g01036 674 FunFam L-type lectin-domain containing receptor kinase S.4 421 627 - -
Vifa5g01036 674 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Vifa5g01036 674 CDD lectin_legume_LecRK_Arcelin_ConA 27 265 IPR001220 GO:0030246
Vifa5g01036 674 Pfam Protein kinase domain 344 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa5g01036 674 SMART serkin_6 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01036 Vifa-Chr5 304963440 304965464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01036 21 670 Receptor kinase-like Gene Family AT3G55550 59.636 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vifa5g01036 Pkinase 4.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01036 - - gmx:100784346 1027.31