Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00904 ATGGTGGAAGCAACAACAAGATTATCGGTGGTTGGGACCGGAGCACCTGATTTATTCTACAAAGAGACTCAATGCTTCGGCTATGTGGCTTGCTCGGTCGCTTGTAAGAGCTTAGGCCCATTCCACAACGATGGCTATGTTCTCGGCATCGACCAAAAGAATGTTAAAGTCCCCCCTCCTTGTGATTCCAGGGTGAAACTGATTAACAATTTATATTCTGATTACAATTTAGTATCAATATATCAACACGAAGAAACTAAGCGGACTATCATAAGGCTGGAGCAGGGTGTTCACTCTTTCACGCAAAAAGCCATGGCTTCACACGGAGCATTGGCAATGTTATATGGCTGCCACTCAAATTACTATATCAAGAAACCTGAGGTACAAGAAGCGCAAAATGGACAAGTAGAATTGGAAAAACATGTCATCACAAAGACATTGACTAAGCCATCTGAGGCATATTATGATGCCAAAAACCTGCCACATGTTCTTGTGAGTACAAAAATATGTTTTGTGTGA 519 0.4181 MVEATTRLSVVGTGAPDLFYKETQCFGYVACSVACKSLGPFHNDGYVLGIDQKNVKVPPPCDSRVKLINNLYSDYNLVSIYQHEETKRTIIRLEQGVHSFTQKAMASHGALAMLYGCHSNYYIKKPEVQEAQNGQVELEKHVITKTLTKPSEAYYDAKNLPHVLVSTKICFV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00904 172 Gene3D - 134 170 - -
Vifa5g00904 172 PANTHER MICROSPHERULE PROTEIN 1 75 128 IPR037912 GO:0002151|GO:0031011|GO:0071339
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00904 Vifa-Chr5 270030138 270032787 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00904 129 169 Core DNA Replication Machinery Family AT5G67100 60.976 2.01e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00904 - - tpra:123898987 84.7297