Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00876 ATGCTTGAAATCCAAGGCTACCTAGTGTTATTCCTTCTATGGTTCATTTCAACTATTTTCATTCGATCACTTTTCAAAAAATCTGAGTCTTATAAACTACCACCTGGCCCACCAATTTCTTTTCCAATTCTAGGGCATGCACCTTATCTTAGATCACTCCTTCATCAAGCACTTTACAAACTCTCCACACGTTATGGACCTTTGATGCATATAATGCTAGGTTCACAACATGTCATAGTAGCATCCTCAGCCGAGAGTGCGAAACAAATTCTAAAAACATGCGAAGAGTCGTTTTGCAATAGGCCAATTATGATTGCGAGTGAGAGTTTAACCTATGGTGCTGCTGATTATTTCTTCATACCTTATGGAAACTATTGGAGGTTTCTCAAGAAGCTTTGCATGACTGAGCTTCTTAGTGGAAAAACTCTTGAGCATTTTGTGAGTATACGTGAGGATGAAGTTAAGTGTTTTTTGAGGAACCTTTTGGCGATATCGAAAAGTGGTAAACCTATTGAAATGCGGCATGAACTTATTAGACATACTAATAATATCATTTCTAGAATGACAATGGGGAAAAAGAGTAATGGTGTGAATGATGAGGTTGGTGAGTTGAGGAAAGTGATTAGGGAAATTGGTGAACTTCTTGGTGCTTTTAATTTGGGCGATATTGTTGGGTTTATGAGACCTTTTGATCTACAAGGGTTTGGGAAGAAGAATAATGATACACATCATAAGATGGATGCGATGATGGAGAAAGTGTTGAAGGAACATGAAGAGGTTAGGGCTAAAGAAGGGGAAGGAAGTGATAGGAAGAAGGATTTGTTTGATATTTTGTTGAACTTGATTGAAGCTGATGGTGCTGATAGTAAACTCTCTAGACAAAGTGCTAAAGCTTTTGCTCTGGACATGTTTATTGCAGGAACAAACGGACCAGCAAGTGTGTTAGAATGGGCACTAGCAGAACTGATAAGAAATCCACATGTTTTCAAGAAAGCAAGAGAAGAAATAGACAGCATTGTTGGCAAAGAAAGACTTGTTAAAGAATCAGACATAACAAATCTCCCTTATCTTCAAGCAGTAGTTAAAGAAACCCTAAGACTCCATCCACCAACTCCAATATTCGCAAGAGAAGCCATAAGAAGTTGCCAAGTTGACGGCTACGATGTTCCAGCATACTCCAAGATTTTCATCAATGCATGGGCTATAGGTAGAGATCCAAACTATTGGGACAATCCATCGGTCTACGACCCGGAAAGATTCTTACAAAACGATGATCCTAGCAAGAGTAAAATCGATGTAAGGGGACAATATTATCAGCTTTTGCCTTTTGGTAGTGGGAGAAGGAGTTGTCCTGGTGCTTCACTTGCTTTGATTGTTATCCAAGCAACACTTGCCAGTTTGGTGCAATGTTATGACTGGGATGTGAATGATGGCAAGAGTAATGAGATTGATATGAAAGAGGTTGGAAGGGTTACTGTGTTTTTGGCTAAACCACTTAAGTGTAAGCCTGTTTCTCATTTTGCTCCATTTTCTGCATGA 1539 0.3918 MLEIQGYLVLFLLWFISTIFIRSLFKKSESYKLPPGPPISFPILGHAPYLRSLLHQALYKLSTRYGPLMHIMLGSQHVIVASSAESAKQILKTCEESFCNRPIMIASESLTYGAADYFFIPYGNYWRFLKKLCMTELLSGKTLEHFVSIREDEVKCFLRNLLAISKSGKPIEMRHELIRHTNNIISRMTMGKKSNGVNDEVGELRKVIREIGELLGAFNLGDIVGFMRPFDLQGFGKKNNDTHHKMDAMMEKVLKEHEEVRAKEGEGSDRKKDLFDILLNLIEADGADSKLSRQSAKAFALDMFIAGTNGPASVLEWALAELIRNPHVFKKAREEIDSIVGKERLVKESDITNLPYLQAVVKETLRLHPPTPIFAREAIRSCQVDGYDVPAYSKIFINAWAIGRDPNYWDNPSVYDPERFLQNDDPSKSKIDVRGQYYQLLPFGSGRRSCPGASLALIVIQATLASLVQCYDWDVNDGKSNEIDMKEVGRVTVFLAKPLKCKPVSHFAPFSA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00876 512 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 Gene3D Cytochrome P450 24 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 FunFam Cytochrome P450 family protein 25 501 - -
Vifa5g00876 512 CDD CYP93 66 503 - -
Vifa5g00876 512 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00876 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Vifa5g00876 512 PANTHER CYTOCHROME P450 98A9 10 501 - -
Vifa5g00876 512 Pfam Cytochrome P450 34 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00876 Vifa-Chr5 257529336 257531056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00876 1 511 Cytochrome P450 AT5G06900 39.417 1.82e-132 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00876 K24188 K15814 gmx:100037459 852.818