Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00874 ATGGAGAGAATTCAACTAGTTGAAAAAGTTGTGATTGTCCCTGAGAAATCAACACCTCCAAAACGAATGTTTTTATCAAACATTGACTTGTCACTTGTTGTTTACCAAGATTCTGCCTCTTTCTTTGATCCTCCAAGTAACCAAATATTTTTCTCAGATATTTGTACCAAGTTATACAATGCACTTGGCAAAATGCTTGTTCATTATGACTTCATGGCTGGCCGGCTCGTGCCGAGTTTAGAAGAGAAAAATCGATTTGAAATTGATTGTAATGATGCTGGTATTGTTGTTGCTGCTGCAAAAACTGATAGAAAGTTGTGTGAATTTGGTGTTATTTCAGCCCCTAATCCAGAGTTAAAGGAATTGGTTGGTTTCTTGCATGAACAAGGTGATGAAGAAATTGACCTAAAAGAAATTCCCCTTGCTTCCTTACAGATGACACAATTTGGATGTGGAAGTTTGGCGCTAGCTTCTCATTACAACCACTGCATCCTCGACGGTATAGCAATAAGAGAATTTGAGACAAATTTGGCGTCACTAACACGTGGGGACGAACTCGTGATAATACCTAACACAGACAGAACAGTGTTAAAAGCAAGGAATCCGCCAAAGATAACTCACCCACATTTCGAATTCTCAAAATCTACAAACATAGAGAATCTATTCACAATACGAGGTACAACTAGCATCAATATTAAGAAACCTGTCGTAGAGAATCAAATTCATGTTCTTCATTTATCACCACAAAAAATCGCAACACTAAAAAAGAAAGCCCTAGGAAAAACCTCCTTAAAAAACATCACAACATTTCAAGTGGTGGCTGCGAAAATCTGGAAAGCGAGAAGCATAGCAACGAAGATCGAAGACGATAAACTATCAACAATGTTGTTTCCGGTCGACGTTAGAAAAAAGCTCGTCCCCGAACTTCCGAATGGATTTGCGGGAAATGCATTAGTCCCCGGTTTTACGAGATCAACTGTGAAGGAGTTAATTGAACAAGGAGATGATTATGCTATAAAGAAAGTGCAAGAAGGGATTGAGAGATTGAATCACGAGTATATAAAATCGGGCATAGATTGGTTAGAGATGAATAAAGGTGTGCCTTGTAATGAAGATAGTTTCTCTTTGGTGGCATGGTGGAGATTAGGGTTAGAGAATGAAGTATTTGCTTGGGGGAGATTGAAGTGTGCTACTCCACTTGTCGTTAAGCCTGGTTTGGTTATGTTATTGCCAGGAGGAGAGGATGAAGGGCATATTAATATATGTTTGAGTTTACCTAAGGATCAATTGGATGAGTTTTGTAGGATAATGTTGGAAACTTAG 1323 0.3862 MERIQLVEKVVIVPEKSTPPKRMFLSNIDLSLVVYQDSASFFDPPSNQIFFSDICTKLYNALGKMLVHYDFMAGRLVPSLEEKNRFEIDCNDAGIVVAAAKTDRKLCEFGVISAPNPELKELVGFLHEQGDEEIDLKEIPLASLQMTQFGCGSLALASHYNHCILDGIAIREFETNLASLTRGDELVIIPNTDRTVLKARNPPKITHPHFEFSKSTNIENLFTIRGTTSINIKKPVVENQIHVLHLSPQKIATLKKKALGKTSLKNITTFQVVAAKIWKARSIATKIEDDKLSTMLFPVDVRKKLVPELPNGFAGNALVPGFTRSTVKELIEQGDDYAIKKVQEGIERLNHEYIKSGIDWLEMNKGVPCNEDSFSLVAWWRLGLENEVFAWGRLKCATPLVVKPGLVMLLPGGEDEGHINICLSLPKDQLDEFCRIMLET 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00874 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 426 - -
Vifa5g00874 440 Gene3D - 230 437 IPR023213 -
Vifa5g00874 440 Pfam Transferase family 4 433 - -
Vifa5g00874 440 Gene3D - 2 214 IPR023213 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00874 3 439 Monolignol Biosynthesis Gene Families AT5G48930 25.828 1.27e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00874 K15400 - gmx:100801822 672.159