Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00870 ATGGTTCGAGAACACCGAGTCGACTCGTTCTACGCCAAACTCCGCCACTCAGCCCACTCCTCCTCCTCCTCCTCCCCCGTCCTCATCTTCCCTTCAACCTCCGATGTCGATTCCCTCTGCGCACTCAAAATCATTTTCAAAATCCTCGAATCCGATTCCATCCAATACGCTTCTTACCCTGTTTCTTCCTTCAGCGAGATTCACACTTACGCAACTGCATCTCAAAACGACGGTCCCATCTCCGTCGTTTTAATCAACTGGGGTTGCCACAAAGATCTTCGCAAAATCTTGAAACTAGGTCCAAACGCTCGTATCTTCGTTATCGATAGTCACCGTCCGATTCATCTTCATAATCTCAGTGACCAAAACGACGCCGTCGTTGTTTTATTCACTCAAGAAGATGAGAAACAAGCAGATCTGGCTTATGACTTCGAGTTTCCGCTTACCGCCTTAGCTAATGCTTCTACAACTATTGATTCAGACTCGGACTCATATTCCGAGTCTGACTCGGACTCGGATTCTGACTCCGAGTCTGATTCGGACGAAGAAAATGGATCGGGAAATAAAAGAAAAAGAAAACGGGATTCTGAAGATGGTGAGAAAGATGAAGAAAAACATGAAGATGCGGTTAAGCTCTATAGAAAGAGGAAGAGAGAGTATTATGGATTGGGAACTTTTCATGGGAAGCCTTCTGGGTGTTTGATGTATGAGCTAGCTCATTTTCTGAGGAGGAATACTGATGAATTGCTTTGGTTAGCTTGTGTTGCGTTGACGGATCAATTCGTGCACGAGAGGCTGAGTGATGAGAGGTATAGTGATGGTGTTATGGAGTTGGAGCAGTATATTAATAGTTCGGGCAATTTGGATGCGGTGAATTCTGTTACGCTTAAGGATGGAACGAAGATTAGAGCGCCGAATTCTTCGCGAATTGCTTATGAGGATGAGCCTAAGCTTATGCTGTTGCAGGAGTGGAATTTGTTTGATTCGATGCTTTGTAGTTCATATATTGCTACGAAGTTGAAGACTTGGAGTGATAATGGGATGAAGAAGTTGAAGCTTTTGTTGGCGAGGATGGGGTTTGCGCTTACGGATTGTCAGCAGAAGTTTCAGTATATGAACGTTGAGGTGAAGAGAAAGATGAAGCGGGAGTTTGAGAAGTTTTTGCCTGAGTATGGGCTTACTGATCTTTATTATCGGGGTTTTTTGCGGATTCATGGTTATAGTTCGAGAGTTTCTGCTGCTGATGTTGTTTATGGTGTTACTGCACTGTTGGAATCGTTTGTGAATTCAGATGGGTCTTGTGCTTCAATGCAGTTCAATGTGGCGTTTGATGCTCTTTCGTTGAACAATGTTGATAAACTCAAAGCTGGGATGCAACAAGCTATTAAGGTTCAGAGATCGATATTGAGGCAGGGGAGTCTCGCGATTATGAAGAGCGGTTGTATTAGAAGTGGAAGGAAGTTTCGATGGGTGAAGCTTGAGGATTCAACGGATTCTAAGTTGTTGGGGTACCCTCAAGCTTTGACAAAGTTTTGTTATTTTCTAATGGATGCTTTGAGAGAAAAGGGTGCGAGGATGAAGCCTTTGATTTGTGCTTGTGTGTCTCAGGATCCAAATAAAGTTCTTATTGTTGGGGTTTGCGGGAGGCCTCGTTTGGCTGCTGCTCAAGGGAATGCGTTTGGGGTTGCGTTTAGAAGTGCGGCCGAGGATGTTGAAAGTGAGTTTTTCCATGAGATGTTTGAGTCATCTTGGATTGTGTTAGAATCTAAATTTCTTAATTCTTTCATGGTTAAGTTGACCGAGAAACTTTGA 1812 0.4371 MVREHRVDSFYAKLRHSAHSSSSSSPVLIFPSTSDVDSLCALKIIFKILESDSIQYASYPVSSFSEIHTYATASQNDGPISVVLINWGCHKDLRKILKLGPNARIFVIDSHRPIHLHNLSDQNDAVVVLFTQEDEKQADLAYDFEFPLTALANASTTIDSDSDSYSESDSDSDSDSESDSDEENGSGNKRKRKRDSEDGEKDEEKHEDAVKLYRKRKREYYGLGTFHGKPSGCLMYELAHFLRRNTDELLWLACVALTDQFVHERLSDERYSDGVMELEQYINSSGNLDAVNSVTLKDGTKIRAPNSSRIAYEDEPKLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALTDCQQKFQYMNVEVKRKMKREFEKFLPEYGLTDLYYRGFLRIHGYSSRVSAADVVYGVTALLESFVNSDGSCASMQFNVAFDALSLNNVDKLKAGMQQAIKVQRSILRQGSLAIMKSGCIRSGRKFRWVKLEDSTDSKLLGYPQALTKFCYFLMDALREKGARMKPLICACVSQDPNKVLIVGVCGRPRLAAAQGNAFGVAFRSAAEDVESEFFHEMFESSWIVLESKFLNSFMVKLTEKL 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00870 603 MobiDBLite consensus disorder prediction 164 181 - -
Vifa5g00870 603 PANTHER CDC45-RELATED PROTEIN 1 602 IPR003874 GO:0006270
Vifa5g00870 603 MobiDBLite consensus disorder prediction 157 208 - -
Vifa5g00870 603 MobiDBLite consensus disorder prediction 182 208 - -
Vifa5g00870 603 Pfam CDC45-like protein 27 602 IPR003874 GO:0006270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00870 1 603 Core DNA Replication Machinery Family AT3G25100 67.980 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00870 K06628 - cave:132187530 904.049