Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00835 ATGCTCAGAAGCATGAAAACGTTAACCACGGTGATTCAAGAGACATTGAGGCTTTATCCACCAGCAGCTTTTGTTGTCAGAACAAACATCGGACTTTGGGGTTCTGATGCCTACAAGTTCAACCCCGAAAGATTTGCGAATGGCGTGCTTGGAGCCTGCAAGATTCCACAGGCTTATATGCCGTTTGGAATCGGTGCCCGTGTTTGTGCCGGACAGCATTTTGCTATGATGGAATTGAAGGTGGTTTTGTCTCTTATCCTGTCAAAGTTTCGGTTCTCTCTTTCGTCAAGTTACTGTCATTCACCGGCGTTTCGTTTGGTTATAGAACCTGGTGAGGGAGTTGTTCTCAACATGACAAGAATTTAA 366 0.4508 MLRSMKTLTTVIQETLRLYPPAAFVVRTNIGLWGSDAYKFNPERFANGVLGACKIPQAYMPFGIGARVCAGQHFAMMELKVVLSLILSKFRFSLSSSYCHSPAFRLVIEPGEGVVLNMTRI 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00835 121 PRINTS P450 superfamily signature 60 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00835 121 PRINTS P450 superfamily signature 10 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00835 121 PRINTS P450 superfamily signature 69 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00835 121 Gene3D Cytochrome P450 1 121 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00835 121 PANTHER CYTOCHROME P450 FAMILY MEMBER 32 110 - -
Vifa5g00835 121 SUPERFAMILY Cytochrome P450 2 119 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00835 121 Pfam Cytochrome P450 32 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g00835 121 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 62 71 IPR017972 GO:0005506|GO:0016705
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00835 4 116 Cytochrome P450 AT5G24900 45.714 3.50e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00835 K24544 - gmx:100780335 190.274