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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vifa5g00828
ATGGGAGCAGCTCTTCAAACAGGTAAGATGGCCGTTCCTCTGCTAACCAAGAAGATTATCAAGAAGCGTGTCAAGAGGTTCATCAGGCCTCAAAGTGACAGGAGAATATGTGTCAAGGAAAGTTGGCGCAGACCCAAGGGTATTGATTCCCGTGTTAGGAGAAAGTTCAAAGGTGTTACGTTGATGCCCAACATCGGTTACGGTTCCGACAAGAAGACCCGTCACTATCTGCCTAATGGATTCAAGAAGTTTGTTGTCCACAATGTCAAGGATTTAGAACTTTTGATGATGCACAACAGGACTTACTGTGCTGAGATTGCACACAATGTCTCGACAAGGAAGAGAAAGGACATCGTTGAACGTGCAGCACAACTGGATGTTGTTGTCACCAACAAACTTGCCAGACTTCGCAGTCAAGAGGATGAATGA
429
0.4545
MGAALQTGKMAVPLLTKKIIKKRVKRFIRPQSDRRICVKESWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVVTNKLARLRSQEDE
142
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vifa5g00828
142
CDD
Ribosomal_L32_L32e
27
131
IPR001515
GO:0003735|GO:0005840|GO:0006412
Vifa5g00828
142
Pfam
Ribosomal protein L32
25
131
IPR001515
GO:0003735|GO:0005840|GO:0006412
Vifa5g00828
142
SUPERFAMILY
Ribosomal protein L32e
8
140
IPR036351
-
Vifa5g00828
142
PANTHER
60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N
10
142
IPR001515
GO:0003735|GO:0005840|GO:0006412
Vifa5g00828
142
SMART
Ribosomal_L32e_2
24
131
IPR001515
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vifa5g00828
Vifa-Chr5
243953625
243955821
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vifa5g00828
10
142
Cytoplasmic Ribosomal Protein Gene Family
AT4G18100
89.474
3.20e-89
253
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vifa5g00828
K02912
-
aof:109837658
244.973
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