Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00788 ATGAAAAATAGAATCCTCAGATTATCTCCATCTACAAACAAAAATGATATTCACATACAACTCTCCGCACAAGATCATTTCTCCTCTTTACTCAAATTTCCATCTTCGCTCCAATTCCTCTTCAAAACGCGCCACTCTAAACCTTTTCTCTTCTCTTTCACAATTTTTATGGATTTGGTGGTAGTGGATTCGGACAAGGGAAACGAGGCAGACCATAGCTGTGTAGAGGAGAGTACAAGTATATTTGATGGAGTTGAAGTTCAAGAGCCATATGTGGGCTTGGAATTTGATTCTGAAGAATCTGCCAGGACATTTTATGTTGAATATGCTAAACGGGTAGGATTTCTTGTACGCGTTATGCAACGTCGGCGTTCTGGAATCGATGGCAGAACTCTTGCTCGTCGACTTGGATGTAACAAACAAGGCTTCTCACCCAATAGCAAGGGAACATTGAGGCAAGAAAAAAGACCAAGGCCCAGTGCCCGAGAAGGTTGCAAGGCAACAATTTTAGTTAAGATGGAAAAATCTGGAAAATGGGTTGTTACAAGGTTTGTAAAGGATCACAACCATCCACTAATTGCTACAGCTAATGGTTTCAGTACAGAGGACGATAAAGACAAGAAAATTGCAGAACTTACTATGGAGTTGGAGCGCCAAGATGAACTCTGTACTGCATATAGAGAAAAGCTACTCAGCTTCATAAACAATCTTGAGGAAGAAACAGAGGAAATGTCCACAAAAATTCAACTAATTATTGAAAATATAAAGAGAGCTGAGTCTGAAATGCAAAAATCTTCGCAGAACAGAAAGCCCCTGGACTGTACTTGA 828 0.401 MKNRILRLSPSTNKNDIHIQLSAQDHFSSLLKFPSSLQFLFKTRHSKPFLFSFTIFMDLVVVDSDKGNEADHSCVEESTSIFDGVEVQEPYVGLEFDSEESARTFYVEYAKRVGFLVRVMQRRRSGIDGRTLARRLGCNKQGFSPNSKGTLRQEKRPRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLIATANGFSTEDDKDKKIAELTMELERQDELCTAYREKLLSFINNLEEETEEMSTKIQLIIENIKRAESEMQKSSQNRKPLDCT 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00788 275 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 63 258 - -
Vifa5g00788 275 Coils Coil 234 268 - -
Vifa5g00788 275 Pfam FAR1 DNA-binding domain 104 193 IPR004330 -
Vifa5g00788 275 Coils Coil 209 229 - -
Vifa5g00788 275 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00788 Vifa-Chr5 234986010 234992068 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa5g00788 FAR1 4.9e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00788 - - mtr:112416292 387.497