Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g00757 | ATGTCCTTCAATCAATCAAAGTCCGATAAGAGTGACCGACGCTCCGCCCGATCCGGAAGCTTCAATCAGCACCGAGGTAACTCCGGCGGTTCTTACGTTAAGGACGGCACCGGCGCCGCCGTGCCTTCTCCTGCACTCTCGTCTTCCCGGAGTTTTAATAAGAAGTCTAATAATCATGCACAAGGTGGACCACCTAGGGTAAACCCTACCCCAGCAAATGCAAATTCAGTAAACCCTACTCCGGCAAATGCGAATTCTGCCGAGTTAAATTATGCTTCTGTAGTCCGGGCAACACCGAATGGTTCTCATGTACAGCCACAATTTCATGGAGGGTCTGATGCATCAATTACAAGTGCAACTACCAAGCCATCTGAAACATCAGCTGCCCAGAGGAGCACCCGGGTTGTTCCTAAAGCTCCTATTTCTCAACCTCCCCCCGTGAGTTCTGATTCAGCAGCTCCTACGACCCCAGCTAAAGGAGATGCATCGAAAGCATTCCCTTTCCAATTTGGATCTATTAGTCCGGGCATTATGAATGTGATGACTATTCCTGCTCGCACAAACTCGGCTCCTCCTAATATAGATGAGCAGAAACATGATCAGGCCCGTCATGATTCTTCAAGACCTGTGCCTTCTGTGCCGACACCTGCTGTTCCAAAGCAGCTTCCTGTTCCAAAGCCGCTGCCAGCTAATAAGGATACTGGTGTCGTTGACCAATCTAAGGGTGGGGAGACTCATACTGGTACAAGGGCAAAAAAAGACACTCAATCGACACATTTACCTCCACCAAGCTTGATGCACAAGCCTTCTGTCATTCCTATATCTGGGATGTCAATGCCAATGCCATATCACCAGCCACATGCACCTGTACACTTTGGTGTTCCTAATCCACAAATTCAACCTCGTAGTATGTCAACAACATCTCTTCAGAGGCCTTTACCAATTGCAAACGCTGCGCAGATGCAACACCAAGTATTCGTTCCAAGTTTTCAACCTCATCCTATGCATCCTCAAGGAATCATGCATCAAGGCCAAAGTATGGGTTTCACTCCTCAAATTGGTCATCAAATGGTCCATCAGTTAGGCAACATTGGTATGGGCATCAGTCCCCAATATTCTCCTCAGCAAGGAGGAAAATTTGCAGCTCCGCCTCCTCGTAAAACTACTCCCGTGAAAATAACTCACCCTGATACTCACGAAGAGCTTAGACTTGATAAAAGGGCCAATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGCCTCATTCTGTCATTCCTTCTCAATCTCCGTCTGTGCAGTCATTTCCTGCTTCTCATCCTAGTAATTACTATCAATCCAATTCTCCCTTTTATCAAACTCCCAGTTCTCTTCCATTATCAAGTAGCCAGATAACCCCCACCACCCAGCCACCAAGAATAAATTATCCAGCGAATCGCGGGCCACCAAATGTTGGTTTCGCAAATTCAGTGTCTCATAATTCCCTGCCCGTTAATAAAACAGTTGCTTCTATTTCTGGCATTGTTGAACCACCTAATCGAGAATTTTCCCGTGATGTGCCGAGTGCGATCTCATCAACTGTGTCTAGAGCGTCTTATGTGTCTATAAAGCCAAGTGGGTCTGGTGTTGTGATCTCATCATTTTCCGATTCAATTTCTGGTGCTAAAAAAGATGGATCTCCTAGTTCCCTGGTAACATCTAGTGATGCATGCTCTTCTGTGCCACCAAAAGGGTCTGACACTTGTTCTGAAATCTCTTCCGAACAATCTACCGTTGCATCTTGTGAGAAGCTTACATCAGCTTCCTTGTTGCCTTCTTCATCTTCCTTGAGTAAGAATATGGTTCCAGATGTATCCAAAAACGAGGGCAGAAACAAGGAAACTCTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAAGAACAGTTGCAGAATCAGGTGGCTGTACGATCTTCTGATGTGGCCAATGAACCTTCCCTAGCTGTTGATGGTGCTACTTCTGATTGTGTAGCAGTTGACGGTGAAAATTTATCAGCAGCCGCTTCAGGCAAATTATCAGCTACCAGTGAGAGCCTGCCTTCTGTGACACTTGAGGAAAAGACCATTTGTTCTAGACAGGTCTCTGTTTGTGTTGCAGCTGAAGGATCTGTTACTCAAGCTGTTATTAGTTTGAACAATCATAACAGTGCTAAGATAGATGAATTATCCCAAGAGGATAAACTGTTAAGACAGACCGTTTCAACTCTTCAGGGATGTAAAAATGTTAGTGACGGCAGGACAGAATTTAATCAACTCAAACAGGGTGTTACAGAGTTAAGCACTGAGGATGTAACTTTAAAGACTGGACAACAAGGGCAGGGTGGATCTACAAGTTACAGCACAGAATGTGACAGGATGTCTAATAATTTAAACACGTCTACCTCTACTGCATTGGATTCTAAAGAAATAACTTCAGAACACTGGAAGGAGAGTTCAGAGGATGCTATTGCTGGCAGTGGCTCCATGTCTCTTCCAGCACCACCGAGTACTACGGACCGACCAAGTTTAGAGCCAAGTAAAGTGAAAGCTTCGTCAAAAGGAAAAAAGAAAAGAAAAGAGGTTCTTCTGAAAGCAGATGCTGCTGGGATGACATCTGATCTTTATAACGCATATAAGAGACCCGAGGAAAAGAAAGAGGCTGTTGTCAGTTTGGAGAACACTGGATGTGTTTCTCCTTCTGGAAATTTGAAGCAGTTGCCTGTGAATGCTTCTCAGCCAAATGCAGTTGCAAATGAACAATTCAGGCAGAGTAAGGCTGAACTTGAGGACTGGGAGGATGTCGCTGACATGTCCACACCAAAACTAGAAGTATCAAATAAAACTCAACTGGTCGGCGACGAAAGTGCAGTTACTGACAAAAAATACTCTCGAGATTTTCTTTTGAAATTTGCAGAGCATTGGACGGATCTTCCTGAAGGGTTTGAAATCTCGTCAGACATGGAGGCTTTGATGACTTCCAGTGTTAGTTCTCATGTTATTGAACGTGATTCACATCCTTCTGCTAGAAGAAATACAGATAGGTCGGGTGGAATGTCTCGGATGGATCGTCGTGGGAGTGGTGTTGTTGAGGACGATAAATGGAGTAAAGCGTCTGGTGTTGTTGGTAGTGGAGGTAATACAGGACTTAGATCTGGCCAAGTAGGCAATTTTGGCGTTTTAAGGAGTCCACGCCCACAGGGAATGCAATATGGGGGAGGGATTCTCTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAACCCTGATGGTGAAAGGTGGCAGCGTAGTGCTAGCTTCCAGCAGAGGGGTTTAATTCCATCTCCTTCTCAATCTCCTATGCAGATGATGCACAAAGCTGAGAAGAAGTATGAGGTTGGTAAAGTGACAGACGAGGAACAGGCGAAGCAGAGGCAATTGAAGGGTATATTGAACAAGTTAACTCCACAGAATTTTGAGAAGCTTTTTGAGCAGGTCAAAGCAGTTAATATAGACAATGCAGTCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAACCTACCTTCTGTGAAATGTATGCCAATTTTTGTTTTCATCTGGCAGCTGCATTGCCTGATCTCAGTCAAGACAATGAAAAGATAACATTTAAGAGATTACTGTTAAACAAGTGCCAAGAAGAATTTGAAAGGGGTGAGAGAGAGCAAGAAGAAGCTAATAAAGCTGATGAGGGTGAGGTGAAACAGTCTGATGAGGAAAGAGAAGCAAAACGATCCAAGGCTAGAAGACGGATGTTGGGTAATATCAGGCTAATTGGAGAACTATATAAGAAGAGAATGCTAACAGAGAGGATAATGCACGAGTGCATCAAAAAGTTATTGGGTCAGTGTCAGAATCCTGATGAAGAAGATATTGAAGCTTTATGCAAACTGATGAGTACTATTGGGGAGATGATTGATCACCCCAAAGCCAAGGAACATATGGATGTATATTTTGAAAGGATTAAATTATTATCAAACAACATGAGTTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATACCATTGATTTAAGAAAGAATAGATGGCAACAAAGAAGAAAAGTTGAAGGTCCTAAGAAGATTGAAGAGGTGCACCGAGATGCTTCCCAAGAGAGGCAATCCCAAGCTGGTAGGCTGGGTCGTGGTATGGGTATTAGTGCAGCAAGAAGGGTCCCTATGGATTTTGGTTCAAGAGGTTCATCTATGTTATCCCCTCCTAACTCTCAGATGGGTGGATTGCCTACTCAAGTTCGTGGGTATGGTTCTCAGGATGTTCGTGGTTATGAAAGGCAATCATCGTATGAGGCTAGGACACTGTCTATTCCCTTGCCTCAAAGGCCTTTAGCCGATGAGTCAATAAATTTGGGACCCCAAGGTGGTCTGGCTAGAGGAATGTCCATTAGAGGTCCTCCTACAGTTTCAAGTTCTACTGCTCTTAATGGTTATAGTAATTTATCTGAACAGGCCTCATACGGCTCTAGGGAGGACCACTCTTCGAGATATGTTCCGGATAGATTTTCTGGTCCAGCTGCTTATGATCAATCAAGTGTTCCAGAGCAAAATATGAATTATGGTAACAGGGACTTGAGAAATGTAAATAGTAGGATTTTTGATAAACCTGTTGGAAATCCACCTCCTGCCCTAGCACAAGAGACATCAGGCGCCCAGAATGCCTCTTCAGAAAACGGTTTGTCTGAAGAGCAACTACAGAACATGTCCTTGGCAGCAATTAAAGAATACTATAGTGCTAATGACGTGAACGAAGTTGTTTTGTGTGTCAAAGATCTGAATTCTCCAAGCTTTCATCCTTCCATGGTTTCTGTCTGGGTCACAGACTCATTTGAGAGAAAGGACATACATCGAGATCTTTTAGCCAAACTGTTGATCAACCTTGTGCAGCGTCATGGTGGCACCTTAAGTCAAGCCCAGCTCATTAAAGGGTTTGAATCTGTTCTAAGTACTTTGGAAGATGTGGTTACGGATGCTCCAAAAGCACCGGAGTTTCTTGGCCGCATTTTCGCTAAAGCTATAACAGAAGACGTAGTCTCTTTGAAGGAGATTGGGCGGTTAGTACACGACGGAGGAGATGAACCAGGGCGCCTCTTACAAATTGGACTTGCAGCTGATGTTCTTGGAAGCACATTAGAAATGATACAAACCGAGAAGGGTGAAGCCTTTTTGGCCGAGATCCAGACAAGCTCTAACTTGCAATTGCAGACTTTCCAGCCACCAGGGCCGACTAAATCACGAAAACTAGAAAAATTTATTTAG | 5334 | 0.4409 | MSFNQSKSDKSDRRSARSGSFNQHRGNSGGSYVKDGTGAAVPSPALSSSRSFNKKSNNHAQGGPPRVNPTPANANSVNPTPANANSAELNYASVVRATPNGSHVQPQFHGGSDASITSATTKPSETSAAQRSTRVVPKAPISQPPPVSSDSAAPTTPAKGDASKAFPFQFGSISPGIMNVMTIPARTNSAPPNIDEQKHDQARHDSSRPVPSVPTPAVPKQLPVPKPLPANKDTGVVDQSKGGETHTGTRAKKDTQSTHLPPPSLMHKPSVIPISGMSMPMPYHQPHAPVHFGVPNPQIQPRSMSTTSLQRPLPIANAAQMQHQVFVPSFQPHPMHPQGIMHQGQSMGFTPQIGHQMVHQLGNIGMGISPQYSPQQGGKFAAPPPRKTTPVKITHPDTHEELRLDKRANAYSDGGSSGARPHSVIPSQSPSVQSFPASHPSNYYQSNSPFYQTPSSLPLSSSQITPTTQPPRINYPANRGPPNVGFANSVSHNSLPVNKTVASISGIVEPPNREFSRDVPSAISSTVSRASYVSIKPSGSGVVISSFSDSISGAKKDGSPSSLVTSSDACSSVPPKGSDTCSEISSEQSTVASCEKLTSASLLPSSSSLSKNMVPDVSKNEGRNKETLSRSNSLKDNQKKEQLQNQVAVRSSDVANEPSLAVDGATSDCVAVDGENLSAAASGKLSATSESLPSVTLEEKTICSRQVSVCVAAEGSVTQAVISLNNHNSAKIDELSQEDKLLRQTVSTLQGCKNVSDGRTEFNQLKQGVTELSTEDVTLKTGQQGQGGSTSYSTECDRMSNNLNTSTSTALDSKEITSEHWKESSEDAIAGSGSMSLPAPPSTTDRPSLEPSKVKASSKGKKKRKEVLLKADAAGMTSDLYNAYKRPEEKKEAVVSLENTGCVSPSGNLKQLPVNASQPNAVANEQFRQSKAELEDWEDVADMSTPKLEVSNKTQLVGDESAVTDKKYSRDFLLKFAEHWTDLPEGFEISSDMEALMTSSVSSHVIERDSHPSARRNTDRSGGMSRMDRRGSGVVEDDKWSKASGVVGSGGNTGLRSGQVGNFGVLRSPRPQGMQYGGGILSGPMQSMVNQGGMQRNNPDGERWQRSASFQQRGLIPSPSQSPMQMMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREAKRSKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQCQNPDEEDIEALCKLMSTIGEMIDHPKAKEHMDVYFERIKLLSNNMSLSSRVRFMLKDTIDLRKNRWQQRRKVEGPKKIEEVHRDASQERQSQAGRLGRGMGISAARRVPMDFGSRGSSMLSPPNSQMGGLPTQVRGYGSQDVRGYERQSSYEARTLSIPLPQRPLADESINLGPQGGLARGMSIRGPPTVSSSTALNGYSNLSEQASYGSREDHSSRYVPDRFSGPAAYDQSSVPEQNMNYGNRDLRNVNSRIFDKPVGNPPPALAQETSGAQNASSENGLSEEQLQNMSLAAIKEYYSANDVNEVVLCVKDLNSPSFHPSMVSVWVTDSFERKDIHRDLLAKLLINLVQRHGGTLSQAQLIKGFESVLSTLEDVVTDAPKAPEFLGRIFAKAITEDVVSLKEIGRLVHDGGDEPGRLLQIGLAADVLGSTLEMIQTEKGEAFLAEIQTSSNLQLQTFQPPGPTKSRKLEKFI | 1777 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g00757 | 1777 | ProSiteProfiles | MI domain profile. | 1589 | 1713 | IPR003891 | - | |
Vifa5g00757 | 1777 | Gene3D | - | 1581 | 1777 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 1372 | 1401 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 42 | 137 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 1508 | 1545 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 1004 | 1059 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 1 | 167 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 836 | 851 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 779 | 865 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 1560 | 1585 | - | - | |
Vifa5g00757 | 1777 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 369 | 1777 | IPR045208 | GO:0003743 | |
Vifa5g00757 | 1777 | SUPERFAMILY | ARM repeat | 1141 | 1371 | IPR016024 | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 605 | 655 | - | - | |
Vifa5g00757 | 1777 | FunFam | Eukaryotic translation initiation factor 4G | 1583 | 1776 | - | - | |
Vifa5g00757 | 1777 | Pfam | MA3 domain | 1596 | 1703 | IPR003891 | - | |
Vifa5g00757 | 1777 | SUPERFAMILY | ARM repeat | 1583 | 1775 | IPR016024 | - | |
Vifa5g00757 | 1777 | Gene3D | - | 1147 | 1382 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 1239 | 1268 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 1570 | 1585 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 550 | 584 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 1372 | 1393 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 638 | 653 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 779 | 814 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 392 | 408 | - | - | |
Vifa5g00757 | 1777 | SMART | if4_15 | 1147 | 1369 | IPR003890 | GO:0003723|GO:0005515 | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 184 | 266 | - | - | |
Vifa5g00757 | 1777 | Coils | Coil | 1229 | 1249 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 369 | 484 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 421 | 474 | - | - | |
Vifa5g00757 | 1777 | Pfam | MIF4G domain | 1147 | 1368 | IPR003890 | GO:0003723|GO:0005515 | |
Vifa5g00757 | 1777 | Coils | Coil | 920 | 940 | - | - | |
Vifa5g00757 | 1777 | SMART | ma3_7 | 1590 | 1704 | IPR003891 | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 212 | 226 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 618 | 637 | - | - | |
Vifa5g00757 | 1777 | MobiDBLite | consensus disorder prediction | 1008 | 1037 | - | - | |
Vifa5g00757 | 1777 | FunFam | Eukaryotic translation initiation factor 4G | 1147 | 1382 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g00757 | Vifa-Chr5 | 226080524 | 226087864 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g00757 | 1 | 1776 | Eukaryotic Initiation Factors Gene Family | AT3G60240 | 45.189 | 0.0 | 1227 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g00757 | K03260 | - | gmx:100796636 | 2247.24 |