Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00724 ATGAAGGCTATGCCCTTACCTTTTGAAGAAGAGCACATAGGAAAAAGGGTGTTGGATTTTGGTTCAAGTGTTGTTGTTTCAGATTCATTCTTGTTTCAACAACAGCAAGAAAAGTTTGTACAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGATGTTTTTGACCTCAAAAAACCAAATCCACAACCACAAGCCACTCCTACTTCATCCTCAACACTGTCTTCCTCACACGGCAGCGCCGCGGGAGGCGCTTCAGCCGATAGCAACAGCAACAAGAACAACATACCTGAAGTTGAAGGAAAAAGATGTGGAGGAATGGAAGATTGGGAGAGTGTTTTGTCTGAATCACCAAGTCAAGATCAAGATCATTCAATTTTGAAATTGATTATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTGCAAGTTGGGACTAGTAATTCTCATTCTCATTCTCAGCAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAACAAAGTTCTGTGCTTGACCCTATTTCTTCAAATGTTAACAACAACAACAACTTTGTAACTAGCATTGATTCGTCGTCGGTTGTTGCTGCTACGGCTACTGAGATTTGTTCTGATTTCCCTTTTGGTAGAGTGATGAATCAAACTCAGAACCCTATTTTCAATTCTTCACTCGCTCATAGTGGTTTGTTTCATCATCATCAACAACAAGAACAACCAATTGAGTCACTTGATGCAAAGCTACCTCAATTTGTTATGAACCAAAGCCAAACTCAGTTTATGCCTAACCCTAGTTTGGTTTTTCCTTTCGCGTATTCTCAGCTGCAAGAGAATCAAGAGATTTATCCTCAGCCGCCGGCGAAAAGACTCAATTGTGGGAATAATTATGAAATTCCAAAGTTACCCTTTTTGGATTCTGGTCAAGAGTTGTTTTTTAGGCGGCAGCAACAGCAGCATCAGCAGCAGCAGCTTCAACTGCTTCCGCATCATCTGCAGCAGAGGCCAATGGCGCCGAAGCAGAAAATGGGGAATCCTGGAAGCGGTGGCGGCGAAGATGCGGCAGGGAACAATCAGTTCCAGCAAGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGAAGCCGGTAATCCGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCCATTGGGAAGCCTTTTCAAAGGGCTGCTTTCTATTTCAAGGAGGCATTACAATTGCTTCTTCAGTCAAATGTCAACAACAGCAACAACAACAATAGCTTTTCGCCTACGGGGCTATTGCTCAAGATTGGTGCTTATAAATCGTTCTCAGAAATCTCACCGGTTCTGCAGTTTGCTAATTTCACTTCCAACCAAGCAATGCTTGAAGCCGTGGAAGGTTTCGATCAAATTCACATAGTAGATTTTGATATCGGTTTCGGTGGACAATGGTCTTCTTTTATGCAGGAATTAGCACTCAGGAACGGTGGTGCACCTTCACTTAAGATCACTGCATTCGTTTCACCCTCTCACCATGACGATATCGAGCTTAGTTTCACTCATGAGAATCTGAAACAGTATGCTGGTGAAATTAACATGTCCTTTGAGCTCGAGATTCTGACACTCGAGTCTCTGAATTCTGTATCATGGCCGCAGCCACTTCGTGACTGCGAAGCAGTTGTTGTTAACTTGCCTATATGCTCTTTCTCAAATTACCCTTCTTACCTTCCTTTGGTGCTTCGATTCATGAAGCAGCTCATGCCTAAAATCGTGGTTACATTGGATAGGAGTTGCGATCGAACTGACACACCGTTTCCTCAGCATATGATTCTCGCTATCCAGTCTTATTCCGGTTTGCTCGAGTCACTTGACGCTGTTAGTGTTAATGTTCATCCGGACGTACTTCAAATGATTGAAAAATACTATCTTCAACCAGCAATCGAGAAGCTTGTTTTGGGCCGTCTGCGTTCACAGGACAGAACACTTCCTTGGAAAAATCTTCTCTTGTCGTCAGGGTTCTCGCCATTGACGTTTAGCAACTTTACTGAGTCACAAGCTGAGTGTTTGGTACAGAGGATTCCCGGCAGGGGATTCCATGTCGAGAAGAAGCAGAATTCACTCGTGTTGTGCTGGCAAAGGAAGGATCTCATCTCGATTTCAACTTGGAGATGCTGA 2196 0.4326 MKAMPLPFEEEHIGKRVLDFGSSVVVSDSFLFQQQQEKFVQRWRENCCYAGIEPNSVDVFDLKKPNPQPQATPTSSSTLSSSHGSAAGGASADSNSNKNNIPEVEGKRCGGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLQVGTSNSHSHSQQDVEFNGFSFMDQQSSVLDPISSNVNNNNNFVTSIDSSSVVAATATEICSDFPFGRVMNQTQNPIFNSSLAHSGLFHHHQQQEQPIESLDAKLPQFVMNQSQTQFMPNPSLVFPFAYSQLQENQEIYPQPPAKRLNCGNNYEIPKLPFLDSGQELFFRRQQQQHQQQQLQLLPHHLQQRPMAPKQKMGNPGSGGGEDAAGNNQFQQAIIDQLFKAAELIEAGNPELAHGILARLNHQISPIGKPFQRAAFYFKEALQLLLQSNVNNSNNNNSFSPTGLLLKIGAYKSFSEISPVLQFANFTSNQAMLEAVEGFDQIHIVDFDIGFGGQWSSFMQELALRNGGAPSLKITAFVSPSHHDDIELSFTHENLKQYAGEINMSFELEILTLESLNSVSWPQPLRDCEAVVVNLPICSFSNYPSYLPLVLRFMKQLMPKIVVTLDRSCDRTDTPFPQHMILAIQSYSGLLESLDAVSVNVHPDVLQMIEKYYLQPAIEKLVLGRLRSQDRTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWQRKDLISISTWRC 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00724 731 MobiDBLite consensus disorder prediction 340 362 - -
Vifa5g00724 731 MobiDBLite consensus disorder prediction 60 108 - -
Vifa5g00724 731 ProSiteProfiles GRAS family profile. 361 730 IPR005202 -
Vifa5g00724 731 Pfam GRAS domain family 371 730 IPR005202 -
Vifa5g00724 731 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 323 725 IPR005202 -
Vifa5g00724 731 MobiDBLite consensus disorder prediction 67 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00724 Vifa-Chr5 205004821 205007016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00724 317 731 GRAS Transcription Factor Family AT4G00150 53.349 8.71e-140 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vifa5g00724 GRAS 5.5e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00724 - - gmx:100792973 890.567