Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00706 ATGGTGGCTTTTACAATTTCACATATTTTCCTAGTCTTCTTGCTATATCCCTTCCAATATTCAAGTTCTTTATCATCATTAAACAAGGGATCTTTTCTCTCAGTAGAGAAACATGCAGAAGATGTACTTGTTTCTTCAAATGGCACATTCTCTGCTGGATTCTATCAAGTTGGAGAAAACGCATTTTCCTTCGCCATATGGTTCACAGAGCTGCGGAATCACAATCCTAACAATATTGTATGGATGGCGAACCGTGAACAACCTGTCAATGGTAAACACTCAAAGCTTTACCTCTTAAAGACAGGAAACATCCTCTTGCTTGATGCAGGTCAACTCAACACTTGGTCTTCAAACACAGCTTCAAATGATCCATTAGAGTTGTATCTCAAAGAAGATGGTAATCTTGTCTTACGTGAGCTTCAAGGAACTACCATCTTATGGCAAAGCTATGATTTCCCAACAAATACTCTCCTTCCAAATCAACCTCTCACTAGATACACTAAACTTATTTCTTCTAGAAGTTATAGTAATTATTCTTCTGGCTTCTATAGGTTATTCTTTGATGATAACAATGTTATTCGACTCGATTATGATGGTCCTGATGTTTCAAGCACATATTGGCCACCAACTTGGATGTCAAGTTGGGATGCTGGAAGGTCAAATTACAATAGTAGTAGAATTGCTTTGTTAGATTCTCTTGGAAAGTTCATTTCATCAGATAATTACATTTTCTCCACATATGATTATGGAACTATTTTGCAAAGAAGATTAACCATAGATTCTGATGGTAATATTCGAGTTTACAGTCGAAGAAACTTGTCAGAAAATTGGTATGTTTCATGGCAAGTAATATCTAATACTTGCATCATTCATGGAATTTGTGGTGCAAATAGCACTTGTAGCTATGATCCTAAAAAGGGTAAGAAATGCTCTTGTTTGCCAGGATATAAAGTGAAGAACTATAATGATTGGTCTTATGGTTGTGAACCTATGTTTGATTTTACATGTAAAAGAAGTGAGTCTACCTTTTTAAAATTACAAGGTTTTGAGCTTTATGGATACGATGGTAATTTTGTTCAGAATATTACCTACAAAGGTTGTGAAAGTTTGTGTTTACAACAATGTAACTGTACAGGATTCCAATACACATATAAAGATGACAGTAACATCTTTGAATGCTATACAAAGCTACAATTGTTGAATGGGAGGCATTCACCAAGTTTTCCAGGAACAACTTACTTGAGACTTCCAAAAGGCAAGAACTTCTCAAAACAAGAGTCTGTGAGTGTAAAAGATCACATTTGTTTAGTGCAGCTTTCTAAACACTATTTCAGAAAGCCAACAGATAATTTGGTGAGGTTTTTTTTGTGGATTTCAATTGCAGTTGGTGGTTTAGAATTTGTTTTCTTTATTGTAGTTGGGGTTTGTTTAAATAAAACCAAAAAAAAGTCTAGTGCAAATCAAAATAGTTATCATCATGCAATATTGGGATTTAGAAGGTATAGTTATTATGAGTTGAAGGTAGCTACAAAGAATTTTAGTAATGAGATTGGAAGAGGTGGAGGAGGGGTTGTCTATAGAGGTACATTGCCAGATCAAAGAGATGTTGCAATAAAGAGATTGAATGAAGCTAAACAAGGAGAAGGAGAGTTTCAAGCCGAGGTAAGCATCATCGGAAGGCTTAATCACATGAACTTGATTGAAATGTGGGGATATTGTATTGAAGGAAAGCATAGAATTTTGGTATATGAGTACATGGAAAATGGCTCTTTAGCTGAAAATCTTTCATCTAAAACCAACACACTTGATTGGAGTAAAAGGTATGATATCGCTTTAGGAATATCTAGAGTTCTAGCTTATCTACATGAAGAATGTTTGGAGTGGATTTTACATTGTGATATAAAGCCACAAAACATACTTCTTGATTCTAACTTTCAGCCCAAGTTAGCAGATTTTGGATTGTCTAAGCTGAAAAATAGAAAGGATCTCAATAATAACTCAACATTCTCAATGATTAGAGGAACAAGAGGATACATGGCCCCTGAATGGATTTTCCATTTACCAATAACATCTAAAGTAGATGTTTATAGTTATGGGATTGTTGTGTTGGAGATGATAACTGGAAAGAATCCAACATTAATGAATATAGAAGGAGAGGATGGAAAAATGACATACAATGGAAGTTTGATAAGTTGGGTGAGAGAGAAAAAGAGGAGTCAATGTTGGGTGGAAGAAATTTTGGATCCAGCAATTGGGACTAGTTGTGATTTAAGTAAGATGGCTATTTTGGTTAGAGTTGCTTTGGAATGTGTAGAGGAAGATATGGATATTAGGCCTAATATGAGTCAGGTGGTTGAGATGCTCCAAAATAATGAAAGAGTTGTTGAGTGA 2391 0.3509 MVAFTISHIFLVFLLYPFQYSSSLSSLNKGSFLSVEKHAEDVLVSSNGTFSAGFYQVGENAFSFAIWFTELRNHNPNNIVWMANREQPVNGKHSKLYLLKTGNILLLDAGQLNTWSSNTASNDPLELYLKEDGNLVLRELQGTTILWQSYDFPTNTLLPNQPLTRYTKLISSRSYSNYSSGFYRLFFDDNNVIRLDYDGPDVSSTYWPPTWMSSWDAGRSNYNSSRIALLDSLGKFISSDNYIFSTYDYGTILQRRLTIDSDGNIRVYSRRNLSENWYVSWQVISNTCIIHGICGANSTCSYDPKKGKKCSCLPGYKVKNYNDWSYGCEPMFDFTCKRSESTFLKLQGFELYGYDGNFVQNITYKGCESLCLQQCNCTGFQYTYKDDSNIFECYTKLQLLNGRHSPSFPGTTYLRLPKGKNFSKQESVSVKDHICLVQLSKHYFRKPTDNLVRFFLWISIAVGGLEFVFFIVVGVCLNKTKKKSSANQNSYHHAILGFRRYSYYELKVATKNFSNEIGRGGGGVVYRGTLPDQRDVAIKRLNEAKQGEGEFQAEVSIIGRLNHMNLIEMWGYCIEGKHRILVYEYMENGSLAENLSSKTNTLDWSKRYDIALGISRVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLKNRKDLNNNSTFSMIRGTRGYMAPEWIFHLPITSKVDVYSYGIVVLEMITGKNPTLMNIEGEDGKMTYNGSLISWVREKKRSQCWVEEILDPAIGTSCDLSKMAILVRVALECVEEDMDIRPNMSQVVEMLQNNERVVE 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00706 796 SUPERFAMILY Protein kinase-like (PK-like) 487 788 IPR011009 -
Vifa5g00706 796 Pfam S-locus glycoprotein domain 243 319 IPR000858 GO:0048544
Vifa5g00706 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 171 IPR036426 -
Vifa5g00706 796 Gene3D Phosphorylase Kinase; domain 1 472 585 - -
Vifa5g00706 796 ProSiteProfiles Protein kinase domain profile. 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa5g00706 796 CDD PAN_AP_plant 335 417 - -
Vifa5g00706 796 CDD B_lectin 43 153 IPR001480 -
Vifa5g00706 796 Pfam Protein kinase domain 514 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa5g00706 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Vifa5g00706 796 CDD STKc_IRAK 529 790 - -
Vifa5g00706 796 FunFam Putative receptor protein kinase ZmPK1 21 152 - -
Vifa5g00706 796 PANTHER OS07G0415500 PROTEIN 5 791 - -
Vifa5g00706 796 Pfam D-mannose binding lectin 79 165 IPR001480 -
Vifa5g00706 796 FunFam Putative receptor-like protein kinase 586 796 - -
Vifa5g00706 796 Gene3D Transferase(Phosphotransferase) domain 1 586 795 - -
Vifa5g00706 796 PIRSF SRK 1 796 IPR024171 GO:0004674
Vifa5g00706 796 ProSiteProfiles Bulb-type lectin domain profile. 18 150 IPR001480 -
Vifa5g00706 796 Pfam PAN-like domain 336 396 IPR003609 -
Vifa5g00706 796 FunFam S-receptor-like serine/threonine-protein kinase 479 585 - -
Vifa5g00706 796 SMART serkin_6 511 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa5g00706 796 SMART ntp_6 338 416 IPR003609 -
Vifa5g00706 796 SMART blect_4 34 153 IPR001480 -
Vifa5g00706 796 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Vifa5g00706 796 Gene3D - 23 151 IPR036426 -
Vifa5g00706 796 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00706 Vifa-Chr5 197714845 197727044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00706 445 794 Receptor kinase-like Gene Family AT1G56120 37.989 1.66e-64 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vifa5g00706 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00706 - - gmx:100784287 1112.44