Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00705 ATGAAAAATATGGATTTCTCATTCACACTATTTTTTCTAGTATTGGCCTTTTCACTCCAATCTTCATCTTCTTCATCATCATTGAGAAAAGGTTCATCCCTCTCAGTTGAAAATCTAGAAGACAAAATCATTTCACCAAATGGCATGTTCACTGCTGGATTTATTTCCATTGGTGAAAATGCATATTCATTTGCCATATGGTTCACAGAACCAAATTCCCTCAAACTCAACACCACAATCATTTGGATGGCAAATCGCGACCAACCGGTTAACGGAAAAAGATCCAAACTCACCCTTTTAAACACAGGAAACATTGTCTTGCTTGATGTTTCTCTAAACAAGGTTTGGTCTTCAAACACTGCATCATTGAAACCATTAGTCTTACATCTCAAAAATGATGGAAATCTTGTGTTGCTTGAGCTTCAAGGAACCATGATTTTATGGCAGAGTTTTGATTCTCCAACAGATACTCTCCTTCCTGGTCAACCTCTTACCAGATATACAAAGCTTGTAGCTTCAATAAGTGAGACTAATCATTCATCTGGCTTCTATACGTCGTTTTTCGACGATGAAAATATTTTCGGTCTTCATTACAATGGCCGCGATGTTTCTAGCTCTTATTGGCCAAGGCCTTGGCTTCTAAGTTGGGATGTTGGCAGATCAAATTTCAACAGTAGCAGAACTGCAGTGTTGGACTCTCTTGGTAATTTCCATTCATCTGATAATTTCACTTTTTCAACTTCCGATTATGGATCTGTGCTGCAAAGAATGATGAAACTTGATTCTGATGGTATGGTGAGAGTTTATAGCAGAAATAATGTGTCAAAGAATTGGTATGTTTCATGGCAAGCCTTTTCTGGTGCTTGCTTGGTTCATGGAATTTGTGGAGCTAATAGTACTTGTAGTTATAGTCCTAAGTATGGAAGAAAGTGCTCTTGTATTCCAGGGTATAAAATGAAGAATAATAATGATTGGTCTTATGGTTGTGAACCTATGTTTGATTTCACTTGTAACAAAAGTGAGTCAACCTTTTTAGAGATGAAGAATGTTGAGTTTTATGGTTATGACTTTCATTATATTGAAATTTGTAACTATAGCACTTGTGAAGATTTATGCATACAAGATTGTAATTGTGTAGCATTTCAACATTCGTTTTGGGAGAAAAAGGGCTTTTATAGGTGTTTTACAAAAACACAAATGCAAAATGGAAGATTTGTACCATCCTTTGAAGGATCAACCTACTTGAGATTACCTAAAGGTAATAGCTTTTCTAGAAAAGAATCTTCATTTCCAAGTAACCATCTTTGTTTAGAAAAGCTTCAAAGAGTTTATGTCAAAGAAAGCGAAAACCAATACGTGAAGTTTTTTCTATGGTTTGTCACTGCGATCGGAGCTTTTGAAACGGTATGCATTTTTGCCGTTTGGTGTTCCCTATATAGGTCGCGTCAAAAGACTAATGCAGACCAACACGGCTACCACCTTGCCGAAATAGGGTTTAGAAAATTCAGTTACTTGGAGCTCAAGAAAGCAACAAAAGGGTTCAGCCAAGAGATCGGAAGAGGAGGGGGAGGCGTTGTATACAAAGGCGTATTATCTGATCAAAGACATGCCGCAATAAAGAGACTTTACAATGCTCAACAAAGAGAAGGTGAGTTTCTCGCAGAAGTAGGCATCATTGGAAGACTTAATCACATGAATTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAATATAGACTATTGGTTTATGAGTACATGGAAAATGGTTCTTTAGCCGAAAATCTATCATCTAATAAACTTGATTGGAGTAAAAGGTACAAAATAGCTTTAGCAATAGCAAGAGTTTTAGCATATCTACATGAAGAATGTTTGGAGTGGATTTTACATTGCGATATAAAGCCACAAAACATACTTCTTGATTCTAACTTCCAACCCAAGCTAGCTGATTTTGGATTGTCTAAGCTACAAAATAGAAACAATCTCAACAATTTAAGTGTATCTACGATTCGAGGAACAAGAGGGTATATGGCACCTGAATGGATTTTCAATTTGCCAATAACATCAAAAGTTGATGTCTATAGCTATGGAATTGTTGTGTTGGAGATGATAACAGGTAAGCGTCCAACAACAGGTTTCAAGGTTGTGAATGGTGAAAAGGAAAGTGTTGGGAGGTTGGTTACATGGGTGAGAGAGAAAAAAGGGACTAGTGTTTGTTGGTTGGAGGAAATTGTTGATGATGAAATTGGATTAGGTTATGATAAAAGTAAAATGGAGATATTGGCTAGAGTTGCTTTGGATTGTGTTGTGGATGAAAGAGATTCAAGACCTACTATGAGTAGAGTTGTTGAAATGCTTCAATACCATGGAATTCAGATATGTGAATAA 2388 0.3664 MKNMDFSFTLFFLVLAFSLQSSSSSSSLRKGSSLSVENLEDKIISPNGMFTAGFISIGENAYSFAIWFTEPNSLKLNTTIIWMANRDQPVNGKRSKLTLLNTGNIVLLDVSLNKVWSSNTASLKPLVLHLKNDGNLVLLELQGTMILWQSFDSPTDTLLPGQPLTRYTKLVASISETNHSSGFYTSFFDDENIFGLHYNGRDVSSSYWPRPWLLSWDVGRSNFNSSRTAVLDSLGNFHSSDNFTFSTSDYGSVLQRMMKLDSDGMVRVYSRNNVSKNWYVSWQAFSGACLVHGICGANSTCSYSPKYGRKCSCIPGYKMKNNNDWSYGCEPMFDFTCNKSESTFLEMKNVEFYGYDFHYIEICNYSTCEDLCIQDCNCVAFQHSFWEKKGFYRCFTKTQMQNGRFVPSFEGSTYLRLPKGNSFSRKESSFPSNHLCLEKLQRVYVKESENQYVKFFLWFVTAIGAFETVCIFAVWCSLYRSRQKTNADQHGYHLAEIGFRKFSYLELKKATKGFSQEIGRGGGGVVYKGVLSDQRHAAIKRLYNAQQREGEFLAEVGIIGRLNHMNLIEMWGYCAEGKYRLLVYEYMENGSLAENLSSNKLDWSKRYKIALAIARVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLQNRNNLNNLSVSTIRGTRGYMAPEWIFNLPITSKVDVYSYGIVVLEMITGKRPTTGFKVVNGEKESVGRLVTWVREKKGTSVCWLEEIVDDEIGLGYDKSKMEILARVALDCVVDERDSRPTMSRVVEMLQYHGIQICE 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00705 795 CDD B_lectin 45 154 IPR001480 -
Vifa5g00705 795 Gene3D Transferase(Phosphotransferase) domain 1 587 792 - -
Vifa5g00705 795 Pfam S-locus glycoprotein domain 239 320 IPR000858 GO:0048544
Vifa5g00705 795 SMART blect_4 34 154 IPR001480 -
Vifa5g00705 795 FunFam Putative receptor-like protein kinase 587 792 - -
Vifa5g00705 795 SMART serkin_6 512 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa5g00705 795 SUPERFAMILY Protein kinase-like (PK-like) 491 789 IPR011009 -
Vifa5g00705 795 PIRSF SRK 2 791 IPR024171 GO:0004674
Vifa5g00705 795 Gene3D Phosphorylase Kinase; domain 1 476 586 - -
Vifa5g00705 795 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Vifa5g00705 795 Pfam D-mannose binding lectin 79 166 IPR001480 -
Vifa5g00705 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Vifa5g00705 795 PANTHER OS07G0415500 PROTEIN 9 787 - -
Vifa5g00705 795 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Vifa5g00705 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 209 IPR036426 -
Vifa5g00705 795 ProSiteProfiles Protein kinase domain profile. 512 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa5g00705 795 CDD STKc_IRAK 531 787 - -
Vifa5g00705 795 Gene3D - 20 152 IPR036426 -
Vifa5g00705 795 ProSiteProfiles Bulb-type lectin domain profile. 19 151 IPR001480 -
Vifa5g00705 795 FunFam S-receptor-like serine/threonine-protein kinase 481 586 - -
Vifa5g00705 795 Pfam Protein kinase domain 515 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00705 Vifa-Chr5 197198145 197200532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00705 502 786 Trihelix Transcription Factor Family AT5G38560 41.297 4.37e-62 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vifa5g00705 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00705 - - mtr:11433991 1299.26