Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00691 ATGAAGGAAAGTGGAGCAGCAACAACAACAACAGGAGCACCTTCTTCTTCATCTTCTTCATGGAATAGGCTCCCTCCTATGCCTCCACAAAGATTTGAAGATAGCGATGAAGATCTATTCGAAGTTCCAGATGTAGAAGCTACACAATGTCAAAGTGTTCATTCTAAAGCTACAAGTCAAAACAGTAACCATAATCAAAGCAATGTAACAGATCCTCAACTTCAAGGTGCAAAGCGTCGTCGAGGAAGAAACCCGATCGATAAAGAGTATAGACGACTCAAAAGGTTGCTAAGGAACAGGGTCTCTGCCCAACAAGCTAGAGAAAGAAAGAAGGTGTATGTGAATGAGTTAGAATCAAGAGCTAAAGAAATGGAAGATAAGAATTCTAACTTAGAAGAACGAATTTCAACTTTGATCAATGAAAACACCATGCTCAGAAAGGTTCTTATGAACACTAGACCCAAAGTTGATGAGAGCAATGAAGGTTAG 489 0.3967 MKESGAATTTTGAPSSSSSSWNRLPPMPPQRFEDSDEDLFEVPDVEATQCQSVHSKATSQNSNHNQSNVTDPQLQGAKRRRGRNPIDKEYRRLKRLLRNRVSAQQARERKKVYVNELESRAKEMEDKNSNLEERISTLINENTMLRKVLMNTRPKVDESNEG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00691 162 Gene3D Single helix bin 110 151 - -
Vifa5g00691 162 Coils Coil 107 148 - -
Vifa5g00691 162 MobiDBLite consensus disorder prediction 1 91 - -
Vifa5g00691 162 CDD bZIP_HY5-like 101 142 - -
Vifa5g00691 162 MobiDBLite consensus disorder prediction 76 91 - -
Vifa5g00691 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 152 IPR004827 GO:0003700|GO:0006355
Vifa5g00691 162 FunFam Transcription factor HY5 110 151 - -
Vifa5g00691 162 SUPERFAMILY Leucine zipper domain 90 150 IPR046347 GO:0003700|GO:0006355
Vifa5g00691 162 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 7 159 IPR044280 GO:0000981|GO:0045944
Vifa5g00691 162 MobiDBLite consensus disorder prediction 48 74 - -
Vifa5g00691 162 SMART brlzneu 87 151 IPR004827 GO:0003700|GO:0006355
Vifa5g00691 162 MobiDBLite consensus disorder prediction 1 25 - -
Vifa5g00691 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Vifa5g00691 162 Pfam bZIP transcription factor 88 147 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00691 77 158 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 79.268 8.30e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vifa5g00691 bZIP_1 6.8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00691 K16241 - gmx:100783826 204.142