Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g00675 | ATGAATGATTCAAAGTTACAGTTTTGGGAAGCATTAGACAACTGTGTTGGTACAGACACCATCACATCATCTCAATATATCAAGATCAAAGACCATGAAACTCTAGTCTCTAAAGATGGTAACTTCACCTTGGGAGTTTTTAGCCCTAAAAACTCTACAAAACGATACGTTGGAATTTGGTGGAGGCTTCAATCTACAGTCATATGGGTGGCAAACAGAAACCAACCACTAAATGATTCTAATGGGATTATCACAATATCTGAAGATGGAAATCTTGTGATATTAAATGGACAAGAACAAGTCATTTGGACATCAAATGTTTCCAACATAGCATCCAATACAAGGTCTGAGTTTTCAGACTTTGGTAACCTCGTTCTTTTGGATAGCCGAACCAGGAACGTCCTATGGCAGAGTATTCAGCATCCTTCAGATACATTACTGCCTAGCATGAAACTTTCAACCAACAAAAGAACAGGTACGAGTATAAAAATCAATTCATGGAAAAGCCCTACTGATCCAACCTTGGGAAACTTCTTTTGTAGTACTGTTGAACGCCTACATATAATTGAAGTGTTCATTTGGAATGGAACTCAGCCATATTGGCGCAGTGGTCCCTGGAATGGCAGGGTCTTCACTGGAATACAAACAATGACAGTTGAATATTTTTTTGGTTTTCAAGGAGGAGATGATGGTGAAGGGAATATTAACATATATTTTACTATACCAGATGATGAGAATTTTTGGATCTATCGCCTGAATTCACAAGGAAAATTAGAAGAAACGGGGTGGGATGATGAAAAGAAAGAAATGCGAGTTACATGGACAAGCCGGGAATCCGAGTGTGATGTATACGGTATATGTGGGGCATTTGCAAGCTGTAATTCATTGAGTTCCCCAATATGTAGCTGTTTGAGAGGGTTTGAGCCCAGAAACATAAAAGAATGGAATACACATAACTGGGCTGCCGGCTGTGTTAGGAGGACACCTTTGCAGTGTGAAAGGGTCATCAATAAAACCGCAAGTGCAAAGCAAGACGGGTTTTTGAAATTGCAAAACGTTAAAGTTCCAGATTTTGCACAAGGTTTAGCTGTTCCACCAGAAGCGTGCATAAACTTATGCTTGAGTAATTGCTCTTGCATTGCATACTCTTTCGCGGATGAGATTGGTTGTATGTCTTGGACCGGCAATCTACTTGACATACAGCAACTCCAAGATGGAGGACTTGATCTATATGTTCGCGCAGCCTATGCAGAACTTGATCAAGAGAGAAACAAGACAATTGATCAACAGGAAGAGATAAACATGACAAAGGATCAAGAAAAAGAGAGAAAGAAGAAAATCATCATAAGTACAGTGATAATTGGAACTTTCATAATTGTCATTTGTGCATATATCTTGTGGAGAAGGACATCAAACCAACCAGCTAAACGGTGGCTCCTTACTAAATCGGCAAGGAAAAAGAACAACAAAGCTTTCCAACTATTTAATAAAGGTAGATTACCAGAAGGTTATGCTAGTGACAATGTAATTGGAGAAATGTCCCAAGTTAAACTACAAGAGCTATTAATGTTTGATTTTGAAAAGCTTGCATCTGCAACAGACAACTTCCACTTATCCAACAAGCTTGGACAAGGTGGTTTTGGTTCAGTATACAAGGGGAAACTGGAAGATGGTCGAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGGCTGGAGGAATTCATGAATGAAGTAGTTTTGATTTGTAAGCTTCAACATCGCAATCTTGTAAGACTTATTGGTTGCTGTACTGAAGGTGATGAAAAGATGTTGATATATGAGTACATGCCCAACAAAAGTTTAGATGCATTCATCTTTGATCCATCAAAAAATAATCTCTTAAATTGGATCACACGGTATAGCATAATAGAAGGAATAGCTCGAGGATTGCTATATCTTCATAGAGATTCTAGACTAAAAATTATTCATAGAGATTTGAAGGCAAGTAATGTCTTGTTAGACGAGGAGCTGAATCCAAAAATATCTGACTTTGGTATGGCTAGAATCTTTGGAGGGGGAGTAGATCAGGCCAATACTAACAGGATTGTTGGAACCTATGGTTATATGTCTCCTGAATATGCAATGCAAGGATTGTTTTCGGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGTTACTAGAGATTCTTATGGGGAGAAGGAACTCTAGTTTTTGTGACAATGAGCACTCACTAAGCCTTTTAGGATTTGTTTGGATTCAATGGAGGGACAACAATATTTTATCTCTAATAGATCGAGAAATATATGATCCTAGTCATCACAGTTACATTTTAAGGTATATACATATAGCACTTTTGTGTGTACAAGAACTTGCTGTAGATAGGCCTACTATGGCTGCAGTAATTTCTATGCTTAACAGTGAAGCTGCATTACATCCTCCTAGTAAACCCGCATTCATCCTGATGGAGAATATGTTGAACTTAAAGAGGCCTGAAGAATGTCAAAGTGTTAGTTCCATCAATAATGTCAGTATTACAGAAATCTGTGGCAGATAG | 2562 | 0.3817 | MNDSKLQFWEALDNCVGTDTITSSQYIKIKDHETLVSKDGNFTLGVFSPKNSTKRYVGIWWRLQSTVIWVANRNQPLNDSNGIITISEDGNLVILNGQEQVIWTSNVSNIASNTRSEFSDFGNLVLLDSRTRNVLWQSIQHPSDTLLPSMKLSTNKRTGTSIKINSWKSPTDPTLGNFFCSTVERLHIIEVFIWNGTQPYWRSGPWNGRVFTGIQTMTVEYFFGFQGGDDGEGNINIYFTIPDDENFWIYRLNSQGKLEETGWDDEKKEMRVTWTSRESECDVYGICGAFASCNSLSSPICSCLRGFEPRNIKEWNTHNWAAGCVRRTPLQCERVINKTASAKQDGFLKLQNVKVPDFAQGLAVPPEACINLCLSNCSCIAYSFADEIGCMSWTGNLLDIQQLQDGGLDLYVRAAYAELDQERNKTIDQQEEINMTKDQEKERKKKIIISTVIIGTFIIVICAYILWRRTSNQPAKRWLLTKSARKKNNKAFQLFNKGRLPEGYASDNVIGEMSQVKLQELLMFDFEKLASATDNFHLSNKLGQGGFGSVYKGKLEDGREIAVKRLSRASGQGLEEFMNEVVLICKLQHRNLVRLIGCCTEGDEKMLIYEYMPNKSLDAFIFDPSKNNLLNWITRYSIIEGIARGLLYLHRDSRLKIIHRDLKASNVLLDEELNPKISDFGMARIFGGGVDQANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEILMGRRNSSFCDNEHSLSLLGFVWIQWRDNNILSLIDREIYDPSHHSYILRYIHIALLCVQELAVDRPTMAAVISMLNSEAALHPPSKPAFILMENMLNLKRPEECQSVSSINNVSITEICGR | 853 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g00675 | 853 | ProSitePatterns | Protein kinases ATP-binding region signature. | 542 | 564 | IPR017441 | GO:0005524 | |
Vifa5g00675 | 853 | Pfam | Protein tyrosine and serine/threonine kinase | 537 | 807 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa5g00675 | 853 | CDD | PAN_AP_plant | 328 | 413 | - | - | |
Vifa5g00675 | 853 | CDD | STKc_IRAK | 542 | 808 | - | - | |
Vifa5g00675 | 853 | Gene3D | - | 15 | 140 | IPR036426 | - | |
Vifa5g00675 | 853 | ProSiteProfiles | Bulb-type lectin domain profile. | 20 | 139 | IPR001480 | - | |
Vifa5g00675 | 853 | Pfam | D-mannose binding lectin | 66 | 168 | IPR001480 | - | |
Vifa5g00675 | 853 | SMART | blect_4 | 26 | 142 | IPR001480 | - | |
Vifa5g00675 | 853 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 504 | 611 | - | - | |
Vifa5g00675 | 853 | ProSiteProfiles | Protein kinase domain profile. | 536 | 817 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g00675 | 853 | Gene3D | Phosphorylase Kinase; domain 1 | 487 | 611 | - | - | |
Vifa5g00675 | 853 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 14 | 139 | - | - | |
Vifa5g00675 | 853 | Gene3D | Transferase(Phosphotransferase) domain 1 | 612 | 815 | - | - | |
Vifa5g00675 | 853 | SUPERFAMILY | Protein kinase-like (PK-like) | 521 | 816 | IPR011009 | - | |
Vifa5g00675 | 853 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 18 | 798 | - | - | |
Vifa5g00675 | 853 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 57 | 173 | IPR036426 | - | |
Vifa5g00675 | 853 | Pfam | PAN-like domain | 342 | 400 | IPR003609 | - | |
Vifa5g00675 | 853 | SMART | ntp_6 | 342 | 414 | IPR003609 | - | |
Vifa5g00675 | 853 | PIRSF | SRK | 4 | 853 | IPR024171 | GO:0004674 | |
Vifa5g00675 | 853 | ProSiteProfiles | PAN/Apple domain profile. | 332 | 415 | IPR003609 | - | |
Vifa5g00675 | 853 | SMART | serkin_6 | 536 | 779 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g00675 | 853 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 612 | 815 | - | - | |
Vifa5g00675 | 853 | Pfam | S-locus glycoprotein domain | 201 | 310 | IPR000858 | GO:0048544 | |
Vifa5g00675 | 853 | CDD | B_lectin | 29 | 142 | IPR001480 | - | |
Vifa5g00675 | 853 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 657 | 669 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g00675 | Vifa-Chr5 | 182813651 | 182817113 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g00675 | 515 | 853 | Receptor kinase-like Gene Family | AT4G11530 | 56.936 | 3.17e-123 | 385 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa5g00675 | PK_Tyr_Ser-Thr | 1.6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g00675 | - | - | tpra:123892366 | 1313.13 |