Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00666 ATGTATATTTATTCTGCAGCAGTTCCTCGCTGGCTTCAATTTCTCCTCACCGATAAATTCTACAACGCTTGCTTAATTCATCCCGAAACCAAAAAAAATGAAAAGAACGTATATTGTTTGGATTGTTGCATCAGTCTTTGCCCTCACTGTGTTTCTCCTCACTCCTCTCACCGACTCTTGCAGATCCGAAGATATGTGTATCATGATGTTATCAGAATGGATGATGCTGCAAAACTTATCGATTGTTCTTACATTCAATCCTACAAAACAAACAGTGCTAAAGTGGTCTTTTTGAATCAAAGGCTACAAACCAAGAAGTGCTCCTCCGGCAATGTGTGCAGTACCTGTGACAGAAGTCTGCAAGAACTATACAATTACTGTTCTCTCTCTTGCAAGGTGAATCACCTTGTGAAAACATTGGGTACTTTATCTGGCCACCTTTTCGAGTGCAACTACATGCCATTATCTGATTCTGGACTCGACGATGGTTTAATGACTCCTGACTCGGTTCTTGAACCGGTTGGTTCAAACCGGACTTCATCTGGTTCGGGTGGTTCAGGTGGATATGGTGGAGTGGATTGTAGAACCACTCTTGCTTGCACTGCAACTACTGAGGTAGTGAGAAAGAAGAGAAGTGGTTGTTCAACTTTCCGGTCACCGTGTCGGCCTGCTTGCTCGCCGGTAACTGAAATCACGGTGAATAGTATGAACAGAAGGAAAGGAAATCCGCGGAGGGCCCCACTTTATTGA 750 0.4373 MYIYSAAVPRWLQFLLTDKFYNACLIHPETKKNEKNVYCLDCCISLCPHCVSPHSSHRLLQIRRYVYHDVIRMDDAAKLIDCSYIQSYKTNSAKVVFLNQRLQTKKCSSGNVCSTCDRSLQELYNYCSLSCKVNHLVKTLGTLSGHLFECNYMPLSDSGLDDGLMTPDSVLEPVGSNRTSSGSGGSGGYGGVDCRTTLACTATTEVVRKKRSGCSTFRSPCRPACSPVTEITVNSMNRRKGNPRRAPLY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00666 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 248 - -
Vifa5g00666 249 Pfam PLATZ transcription factor 63 133 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00666 Vifa-Chr5 178637765 178639144 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vifa5g00666 PLATZ 2.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00666 - - pvu:PHAVU_008G142900g 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00666 5 178637765 178639144 Vifa5g00666 5 178637765 178639144 ECH